KEGG   Clavispora lusitaniae ATCC 42720: CLUG_01350
Entry
CLUG_01350        CDS       T01149                                 
Name
(RefSeq) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
clu  Clavispora lusitaniae ATCC 42720
Pathway
clu03030  DNA replication
clu03410  Base excision repair
clu03420  Nucleotide excision repair
clu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:clu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CLUG_01350
   03410 Base excision repair
    CLUG_01350
   03420 Nucleotide excision repair
    CLUG_01350
   03430 Mismatch repair
    CLUG_01350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:clu03032]
    CLUG_01350
   03400 DNA repair and recombination proteins [BR:clu03400]
    CLUG_01350
Enzymes [BR:clu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CLUG_01350
    6.5.1.6  DNA ligase (ATP or NAD+)
     CLUG_01350
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     CLUG_01350
DNA replication proteins [BR:clu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    CLUG_01350
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     CLUG_01350
DNA repair and recombination proteins [BR:clu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     CLUG_01350
   NER (nucleotide excision repair)
    Other NER factors
     CLUG_01350
   MMR (mismatch excision repair)
    Other MMR factors
     CLUG_01350
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase DNA_ligase_OB_2
Other DBs
NCBI-GeneID: 8499039
NCBI-ProteinID: XP_002617891
UniProt: C4XZG8
LinkDB
AA seq 780 aa
MLFSIISKRRVLLLPLAFQYHVRPIYNLHHMEQQSILRFFGSNKGSTQNKRKSDTVSPSP
KKSARVEEPTNQDIVKNEGEGSTHPIDQSRSIDDLRRTEGKVKESIKDEEASKSEESSSD
AAELVNEKSDEPIDNIEDASRLIDMSKKNHQHQQLNPNAKIPYSRLTDVLDKIEKESGRL
KITALVSEFLLEVLEQYPSPDNLVRVVYLFINRLGPDYEPDLELGLGETLLIKAISECYG
RSAAKIKKDYHEAGDLGLVAQKSRSGQPTMFKPAPLDVDTVFENLTKIAKSTGKDSQTRK
IGIINKMLTACNMKSSEAKFLIRSLEGKLRIGLAEKTVLIALAQAFLNFENKTSKKISPE
QLTKAENVIREAFSLIPNYEIIIRNAHKYGILNLLEHCQLTPGVPLKPMLAKPTKSIGEI
LDRFQGEEFTCEYKYDGERAQVHLLADGSVRVYSRNSEDMSERYPDLLSIVKDFIKVTTN
SEEKESPKSMILDCEAVAWDREKQKILPFQVLSTRKRKDVNESDIKVHICLFAFDLLYYN
NESLITKSLEERRSCLFENFKTIEGKFQYATYKNSSDLDELQAFLDQSVKDSCEGLMVKM
LHGPESFYEPSKRSRNWLKLKKDYLAGVGDSLDLVVVGAYVGKGKRTGSYGGFLLATYND
DTGEYETTCKIGTGFSDEDLASLYAKLKPTEISRPKPFYVYDTKNSNAVPDVWLEPTLLF
EVLTADLSLSPIYKASHQEYGKGISLRFPRFIRTREDKGVEDATTSSQIAEFYERQANVN
NT seq 2343 nt   +upstreamnt  +downstreamnt
atgctcttttcgatcatctcaaagagacgcgtcctcctattaccacttgctttccaatac
cacgtccgtcctatttataatttacatcacatggaacagcaatcgatattgagatttttt
gggctgaataaaggttcgacacaaaacaaaagaaagagcgacacagtgtcaccgctgccc
aaaaaatctgctcgtgtcgaggagccaacgaatcaagacatagtaaaaaatgaaggcgaa
ggatccactcatccaattgatcaaagtcgcctgattgatgacttacgaagaaccgaaggg
aaggttaaagagagtatcaaggatgaagaagcaagtaagctggaagaaagcagtagtgat
gcggctgagctcgtcaatgaaaagagcgatgaacctatcgataatattgaggatgctagc
cggcttattgacatgtccaagaaaaaccatcaacatcaacaattgaatccaaatgcaaag
atcccatattctcggcttactgacgtattggacaaaatcgaaaaggaatcaggccgttta
aaaattactgctcttgtctcagagttccttctagaagtcctagaacaatatccaagtcca
gacaacttggtacgcgttgtctatcttttcattaatcgtcttgggcccgattacgaaccg
gatttggaattgggtcttggtgagactttgcttatcaaagcgatcagcgagtgttatggt
cgtctggctgccaaaatcaaaaaagactatcatgaggctggtgacttgggccttgttgct
cagaaatctcgcctgggtcaaccgactatgttcaaacctgctcctttggatgttgacaca
gtgtttgaaaacttaactaaaattgcaaagtctacgggaaaggactcgcaaacaagaaag
attggcatcataaacaaaatgctcacggcttgtaacatgaaaagcagcgaagcaaagttt
ctaatcagatcattggagggaaagttacgtattggattggccgagaagactgttttaatc
gcattagctcaagcgttcttgaattttgagaacaagacatctaagaaaattctgcctgaa
cagcttacgaaggcggagaacgtgattcgtgaggccttttcattgatacctaattacgag
atcataatcagaaacgcccacaagtatgggattctcaacttattagagcattgccaatta
actccgggtgtccccctcaaaccaatgttagctaaaccaaccaaatctatcggagagatt
ttggatagatttcagggtgaagaatttacttgtgagtataaatatgacggggaaagagcc
caggttcatctactcgctgatggaagcgtcagagtttactcccgtaattcagaggatatg
tcagagagatatccggatttgctttcgattgtgaaggatttcatcaaagttacaactaat
ctggaagaaaaggagtctccaaagtctatgattttagattgcgaagctgtcgcctgggat
agagagaagcaaaaaattcttccctttcaagtcttgtcaactagaaaacggaaagatgtt
aatgaaagtgatattaaggtgcatatttgcttattcgcattcgatttgctatactacaat
aatgagtctcttatcacgaagtcgttagaggagagaagaagctgtcttttcgaaaacttc
aaaaccatagaagggaagtttcagtacgcaacatataagaactcatcggacctagatgaa
cttcaagcatttctagatcaatcagtgaaggattcatgtgaaggcttgatggtaaaaatg
ttgcatggtcctgagtctttttatgagccttcaaagagatcaagaaattggttgaaattg
aaaaaggattacttggccggtgtgggtgattccctagatttagtggttgtcggagcttat
gttggtaaaggtaagagaacgggatcttatggtggctttttattggcgacttataatgat
gatacgggagaatacgaaaccacctgcaagattggaacaggattttctgacgaggacctc
gcgtcgttgtacgctaaattgaaaccaacggagatttctaggcctaagcctttctacgtt
tacgacacaaagaattctaatgctgttccagatgtatggcttgagccaaccttgctcttt
gaagttttgactgcggatctctctttgagtccgatttacaaagcatctcatcaagagtat
ggtaaaggtatttccttgagatttccacgatttatcagaactagagaggataaaggtgtt
gaagatgccactacgtctagccaaatcgcagagttttacgagaggcaggcaaacgttaat
tag

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