KEGG   Clavispora lusitaniae ATCC 42720: CLUG_03276
Entry
CLUG_03276        CDS       T01149                                 
Name
(RefSeq) hypothetical protein
  KO
K03142  transcription initiation factor TFIIH subunit 2
Organism
clu  Clavispora lusitaniae ATCC 42720
Pathway
clu03022  Basal transcription factors
clu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:clu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CLUG_03276
  09124 Replication and repair
   03420 Nucleotide excision repair
    CLUG_03276
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:clu03021]
    CLUG_03276
   03400 DNA repair and recombination proteins [BR:clu03400]
    CLUG_03276
Transcription machinery [BR:clu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     CLUG_03276
DNA repair and recombination proteins [BR:clu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     CLUG_03276
SSDB
Motif
Pfam: Ssl1 C1_4 VWA_2 zf-HIT VWA FYDLN_acid
Other DBs
NCBI-GeneID: 8497092
NCBI-ProteinID: XP_002616035
UniProt: C4Y542
LinkDB
AA seq 459 aa
MDSDDDFSAHSAESDVPLSPDSDGMARRTRARASEPKQAAYAWEDEYQRTWDIVKDDTSR
PVELLVQQMVDARKAKLSRNAATPFQRGIIRTVVVVVDASRAMLEKDLRPTRFGATVAHL
QDFVAEFFDQNPIAQMAVVMMRNGVASVVSELSGSAQLHIERLRALRARQHTLEPKGDPS
LQNALELARALLTAGGGPTSRSSREIVVVFGALFTSDPGDIHQTIDSLVRDEIRVRVIGL
AAQVAICRELVARTNAGECAGYGVIVGDAHFRELLMACVEPLAVARRAAETATGVPVLRM
GFPSRAPAAPGMPVLCACHPQGGGADTGYWCPQCRSRVCSLPCVCPVCGLMLILSTHLAR
THHHLVPPPDYETKEETKETKETNDSNNDNSNSNNDSSNSNNDSSGNSSERCFGCLAQGD
GALGARYACAACGQRFCIDCDVFVHEVLHNCPGCEARAA
NT seq 1380 nt   +upstreamnt  +downstreamnt
atggactccgacgacgacttttctgcacacctggcggagctggacgtgccgctttcgccc
gactcggacggaatggcccggcgcacacgcgcacgcgcctccgagcccaagcaggccgcc
tacgcctgggaagacgagtaccagcgcacatgggacattgtcaaggacgacacgctgaga
ccggtggagctcctcgtccagcagatggtggacgcacgcaaggccaagctcagccgcaac
gccgccacgccgttccagcgcggcatcatccgcacggtggtggtggtggtggatgcgtcg
cgggccatgctcgagaaggacttgcggcccacgcgctttggcgccacggtggcgcacctc
caggactttgtggcggagtttttcgaccagaacccgatcgcgcagatggccgtggtgatg
atgcgcaacggcgtggcgtcggtggtgagcgagctcagcggcctggcccagctccacatc
gagcgcctccgggcgctccgcgcgcgccagcacacgctcgagcccaagggcgacccgctg
ttgcagaacgcgctcgagttggcgcgggcgcttctcacggccggcggcggaccgacgtcc
cgcagctcgcgcgagatcgtggtggtgtttggcgctcttttcacgctggacccgggcgac
atccaccagaccatcgactcgcttgtgcgcgacgagatccgcgtgcgggtgatagggcta
gcggcgcaggtggccatctgccgcgagcttgtggctcgcaccaacgccggcgagtgtgcg
ggctacggcgtgatagtgggcgacgcgcacttccgcgagcttctcatggcgtgcgtggag
ccgcttgcggtggcgcggcgggcggccgagacggccacgggcgtgccggtgcttcgaatg
ggcttcccgctgcgggcgccggcggcgccgggcatgccggtgttgtgtgcgtgccatccg
cagggcggcggcgccgacacgggctactggtgcccgcagtgccgcagccgcgtgtgtctg
cttccgtgtgtgtgtcccgtgtgcgggctcatgttgatcttgctgacgcacttggcccgc
acgcaccaccacttggtgccgccgccggactacgagacaaaggaggagacaaaggagaca
aaggagacaaacgacagcaacaacgacaacagcaacagcaacaacgacagcagcaacagc
aacaacgattccagcgggaactcctccgagcgctgcttcgggtgtcttgcccagggcgac
ggggcgctcggcgcccgctacgcttgcgcggcctgtggccagcgcttctgcatcgactgc
gacgtgtttgtgcacgaggtgctccacaactgtccgggctgcgaggcccgtgcggcatga

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