Clavispora lusitaniae ATCC 42720: CLUG_05488
Help
Entry
CLUG_05488 CDS
T01149
Name
(RefSeq) hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
clu
Clavispora lusitaniae ATCC 42720
Pathway
clu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CLUG_05488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clu03021
]
CLUG_05488
03019 Messenger RNA biogenesis [BR:
clu03019
]
CLUG_05488
Transcription machinery [BR:
clu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CLUG_05488
Messenger RNA biogenesis [BR:
clu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
CLUG_05488
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CFIA_Pcf11
CID
Motif
Other DBs
NCBI-GeneID:
8495069
NCBI-ProteinID:
XP_002614710
UniProt:
C4YBB0
LinkDB
All DBs
AA seq
565 aa
AA seq
DB search
MVICPRDIYHVCATTPSPFSHFLPTMVFSPLVEDYATSLKELTFNSRPIIVNLTTIAKEN
TDEADGILAAITHRIYHCIPEHKLFALYLLDSICKTVGAPYNVLIGDDIFKLFSHVYLLV
DTPTRARLVKMFDSWRVFRVKGGALPLFPSAEMERIEAFLQQAGFRRAPAGPTAASLVAD
IDALLPAMERRSRAGGDQALAERCAALADLRALLQSQALGPADLAGVSQKLASMKQQEQN
QQNLETQAHQQSMSQNQGSSFQPQTPITQPQTPLPQTPSTLPPTPQTLPAQSLAPSLTQT
PVPTESKARVLFGELLASGLVAVDQSLKPGSRPVYSLVFPRHKYSGAPATNALEQLLLDA
SGQSQYVQIKVKELSKVQKAAAPLQRFVASGDLDMSTLQVLYETKSSKCAQCGKRFTGDD
DGAARKRVHLDWHFRINKRSTNHKANIQSRTWYISQDEWVHFDESSLSEQAAAPVARAET
AAAAPTRAQYVVVPPSETNMNNTCIVCREQVKATYNDALGEWVWDACVYAPGTKTGRKIA
HAACLEETSRKRGPDGLPEAKRVRV
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggttatctgtccacgtgatatatatcacgtgtgtgccactacaccatcgcccttctca
cacttccttccaaccatggtcttttctccacttgtcgaggactacgcaacgtcgctcaaa
gagctcacgttcaactcgcgtcccataattgtcaatctcaccaccatcgccaaggaaaat
accgatgaggccgacggaattctcgcagccattacccatcgcatctaccattgcattccc
gaacacaagcttttcgctctttacttgcttgatctgatctgcaaaaccgtcggcgccccc
tacaatgtgcttattggcgacgacatcttcaagcttttctcgcatgtgtatttgttggtg
gacacgccgaccagggcccgtctagttaagatgtttgatctgtggcgggtattccgagtc
aagggcggcgcgttgccccttttccccctggcggaaatggagcgcatcgaagcgtttttg
cagcaggctggctttcggcgcgcccccgcagggcctacggctgcgctgttggtggcggac
atcgacgcgcttttgcccgccatggagcgccgtctgcgcgcggggggcgaccaggcgctt
gcggaacggtgtgcggcgcttgccgacttgcgcgccctcttacagagccaggctcttggg
ccagcagacttggctggggtgctgcagaaattggcgctgatgaagcagcaggagcagaac
caacagaacctcgagactcaggcccaccagcagctgatgctgcaaaaccagggcctgctg
ttccagccacaaacgccaatcacgcagccacagacacccttgccgcaaacgccgtcaaca
ttgccgccaacgccacagacgcttccagcacaatctcttgcaccttcgcttacacaaacg
ccggttccgaccgagctgaaggcccgtgtgcttttcggcgaattacttgcttcgggctta
gtggctgtggaccagtcactcaagccaggctctcggccagtgtactcgcttgtttttccc
cgccacaagtacctgggcgcaccggccaccaatgctcttgagcagctcttgctagatgcc
agtggccagtctcagtatgtccagatcaaggtcaaagagctttctaaagtgcaaaaggct
gcggctccgctccagcggtttgttgcttcgggcgaccttgacatgctgaccctccaggtc
ttatacgagacaaaactgtccaagtgcgcccagtgcggcaagcgctttactggcgatgac
gatggtgccgctcgcaaacgcgtgcatttggactggcacttccgtattaacaagcgcctg
accaaccacaaggccaacattcaatcgcgcacgtggtatatttcacaagacgagtgggtg
cattttgacgagtcctcactttcggaacaggcggctgcgcctgtggctcgtgctgagact
gctgctgctgctccaacccgtgctcagtacgttgttgtgcctccgagcgagacaaacatg
aacaacacgtgtattgtgtgtcgtgagcaggtcaaggcaacatacaatgatgcactaggc
gagtgggtatgggacgcgtgtgtatacgctccgggaacgaagacgggtcggaagattgcc
cacgcagcatgtttggaggagacgagcaggaagcgtggccctgacggtctaccagaagct
aagagggtgcgggtgtga
DBGET
integrated database retrieval system
