Canis lupus dingo (dingo): 112649167
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Entry
112649167 CDS
T08371
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud03013
Nucleocytoplasmic transport
clud03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112649167 (UPF3B)
03015 mRNA surveillance pathway
112649167 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clud03019
]
112649167 (UPF3B)
Messenger RNA biogenesis [BR:
clud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
112649167 (UPF3B)
mRNA cycle factors
P-body specific factors
112649167 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
112649167
NCBI-ProteinID:
XP_025287031
Ensembl:
ENSCAFG00020004074
LinkDB
All DBs
Position
X:complement(92243183..92259191)
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AA seq
481 aa
AA seq
DB search
MKEEKEHRPKEKRVTLLTPPGASGSAGGASGDSTKGDDKQDRNKEKKEALSKVVIRRLPP
TLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFL
DNKGQEYPAIVEFAPFQKAAKKKTKKRDTKVGTIDDDPEYRKFLESYAADNEKMTSTPET
LLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEE
KRKRKDIEKLKKIDRVPERDKLKDEPKIKVHRFLLQAVNQKNLLKKPEKGDEKELDKREK
AKKLDKENLNDERASGQSCTLPKRSDGEPKDEKPRRPEEESGRDYRERDYERDQERILRE
RERLKRQEEERRRQKERYEKEKAFKRKEEEMKKEKEVVRDKGKKTESTESVGSSEKTEKK
EEVVKRDRIRNKDRPAMQLYQPGARSRNRLCPPDDSTKSGDSAIEKKQESGISHRKEGGE
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggagaaggagcataggcctaaagagaagcgagtaaccctattgactcccccg
ggggcctcaggaagcgccggtggggcttcgggggacagcaccaaaggggacgataaacag
gatcgaaataaagagaagaaagaggcgctgagcaaggtggtaattcggagattacctccc
actttgaccaaggagcagcttcaggaacatcttcagcctatgccggagcatgattatttt
gagtttttttctaatgatactagtctgtatcctcatatgtatgccagagcatacatcaac
tttaaaaaccaagaggacattattttgttcagggatcgctttgatggttatgtattcctt
gacaataaaggtcaggaatatcctgctatagtagaatttgcaccttttcaaaaagctgca
aaaaagaagactaagaaaagagataccaaagttgggactatcgatgatgatccagaatat
agaaaatttttggaaagttatgctgcagataatgagaaaatgacatctactccagagaca
ctgctagaggaaatagaagcaaaaaatagagaattaatagctaaaaagacaaccccactt
ttgagcttcctgaaaaacaagcagagaatgagagaagaaaaaagagaagaaagaaggagg
cgagaaatagaaaggaaaagacaaagagaagaagagaggaggaaatggaaagaagaagaa
aaacgaaaaaggaaagatatagaaaagctaaagaagatagacagagttccagaaagggac
aaattaaaggatgaaccaaagattaaggtacacaggtttctgttacaagctgtgaatcag
aaaaatctactcaagaaaccagaaaaaggagatgaaaaagaattagacaaaagagaaaaa
gccaagaaactggacaaagagaatctgaatgatgaaagagccagtgggcagagttgtaca
ctgcccaagcgctctgatggcgaacctaaagatgaaaagcccaggaggcccgaagaggag
agtggcagagactacagggaacgggactatgagcgagaccaagagcgcatccttcgggag
agggagaggctgaagcggcaggaagaagagcgacgaaggcagaaggagcgctatgagaag
gagaaggcttttaaaagaaaggaagaagaaatgaaaaaagagaaagaagtggttcgggat
aaaggaaagaagactgaaagtacagaatcagtaggcagctcagaaaaaactgaaaagaaa
gaggaagtggttaaaagagatcgcataagaaacaaggatcgcccagcaatgcagctttac
caaccaggagctcgaagccgaaatcgactctgtccacctgatgacagcaccaagtctgga
gattcagcaatagaaaaaaagcaggaaagtggtattagccatagaaaagaaggaggagag
gagtga
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