Canis lupus dingo (dingo): 112662065
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Entry
112662065 CDS
T08371
Symbol
COL22A1
Name
(RefSeq) collagen alpha-1(XXII) chain isoform X1
KO
K16630
collagen type XXII alpha
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
112662065 (COL22A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
112662065
NCBI-ProteinID:
XP_035558669
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Position
13:complement(34012210..34273121)
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AA seq
1612 aa
AA seq
DB search
MHVPQRGRAVASLRGNAVACLLWMLLLWRGDGCQAQRAGCKTVHYDLVFLLDTSSSVGKE
DFEKVRQWVANLVDTFEVGPDRTRVGVVRYSDRPTTAFELGLFGSREAVKAAARHLAYHG
GNTNTGDALRFITRHSFSRQAGGRPGDRAFKQVAILLTDGRSQDLVLDAAATAHRAGIRI
FAVGVGAALREELEEIASEPKSAHVFHVSDFDAIDKIRGKLRRRLCENVLCPSVRVEGDR
FKHINGGSKEITGFDLMDSFRVKEILGRRDNGVQSSYVRMGSFPVVQRTEDVFPQGLPDE
YAFVTTFRFRKTSRKEDWYIWQVIDQYGIPQVSIRLDGENKAVEYDAVGAMKDAVRVVFR
GPRVGDLFDRDWHKVALSIQAQNVSLYVDCALVQTLPIEERENIDIQGKTVIGKRLYDSV
PIDFDLQRIVIYCDSRHAELETCCDIPLGPCQVTVLTEPSPPPPRPPTPGSEQIGFLKTI
NCSCPAGEKGEKGSDGPVGLPGPKGDMGATGLLGAPGPKGEKGDMGRGPFFPGEKGEKGS
LGPPGPPGRDGSKGMRGEPGEPGEPGLPGEVGMRGFQGPPGLPGPPGHVGAPGLQGERGE
KGARGEKGERGLDGFPGKRGETGEQGRPGPPGVAGLQGQKGDVGPAGPPGVPGSVVQREG
LKGEQGAPGPRGHQGPPGPPGAPGLMGPEGKDGPPGLQGLRGKKGEVGPPGTPGLLGPQG
PPGPPGIPGPPGPGGPPGLPGEIGFPGKPGHPGPTGTPGKDGQDGAPGLPGPKGQPGDRG
EDGLPGKPGLRGEVGEQGLAGRPGEKGAAGLPGAPGFPGVRGEKGEQGEKGGLGLPGVKG
DPGEKGEAGPAGPPGLPGTTSLFTPHPRMPGEQGPKGEKGDPGVPGEPGLQGHPGELGPQ
GPTGAPGAKGQEGPRGAPGSTGNPGAPGTVGPPGASGPPGSVGPPGIRGPPGKDGERGEK
GATGEEGSPGPAGPRGDPGVPGLPGTPGQGKDGEPGLRGPPGSPGPLGIKGDRGAPGIPG
SPGNRGDPGIGVAGPPGPSGPPGDKGPPGSRGLPGFPGPQGPAGQDGVPGNPGERGPPGK
PGPSSLLSPGDINLLVKDVCNDCPPGPPGLPGLPGFKGDKGLPGKPGREGTEGKKGDAGP
RGLPGPPGIAGPQGSKGERGADGEIGQKGDQGHPGVPGFMGPPGNPGPRGADGIAGAAGP
PGIQGPQGKEGPPGPQGPFGLPGIPGEEGKEGRDGKPGPPGEPGKMGEPGLPGLEGARGP
PGFKGHMGDSGAPGPRGEPGAMGPPGREGSPGKDGDTGPTGPQGPQGLRGPPGKNGSPGS
PGDPGPAGSPGQKGNKGDHGSPGLPGFLGPRGPQGEPGDKGAPGKEGIPGKPGEPGPKGD
RGDPGNRGDKGPPGGKGQPGDPGIPGHKGLTGLMGPQGPPGENGVAGPPGPPGQPGFPGL
RGESPSVDTLRRLIQEELEKQLETRLAYLLAQRPPVHMKSSQGRPGPPGPPGKDGLPGRA
GPVGEPGRPGQGGLEGPSGPMGPKGERGAKGDPGAPGVGLRGEMGPPGVPGQPGEPGYAK
DGLPGAPGPQGETGPAGHPGPPGPPGPPGQCDPSQCAYFASLAARPSNVKGP
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atgcatgttccccagcgtgggagagccgtggccagcctgcgagggaacgccgtggcctgc
ctcctctggatgttgctgctgtggcgtggggacggctgtcaggcccagagggcaggttgc
aagacggtccactatgacctggtcttcctcttggacacctcctccagcgtgggcaaggag
gacttcgagaaggtccggcagtgggtggccaacctggtggacacctttgaggtgggcccc
gaccgcacccgcgtgggggtcgtgcgctacagcgaccggcccaccacggccttcgaactg
ggcctgttcggctcccgggaggctgtcaaggcggcggcgcggcacctggcctaccacggc
ggcaacaccaacacgggcgacgccctgcgcttcatcacgcgccacagcttctcccggcag
gccggtggccgccccggggaccgcgccttcaagcaggtggccatcctcctgaccgacggc
cgcagccaggacctggtgctggacgccgcggccaccgcgcaccgcgcgggcatccgcatc
ttcgccgtgggcgtcggggcggcgctcagggaggagctggaggagatcgcctcggagccc
aagtctgcccacgtcttccacgtgtccgacttcgacgccatcgacaagatccgtggcaag
ctgaggcgccgcctgtgtgaaaacgtgctgtgccccagcgtccgtgtggaaggagaccgc
tttaagcacatcaacggtggaagcaaggaaatcacaggttttgacctgatggattcattc
agggtgaaggagatcctggggaggagagacaacggggtgcagagctcctatgtccggatg
ggatccttccctgtggtacagaggacagaggatgtgttccctcaaggcttgcctgatgaa
tacgcctttgtcaccaccttccggttcaggaaaacatctcggaaagaagattggtacatc
tggcaggtcatcgaccagtatgggatcccgcaggtctccatccgcctggacggcgagaac
aaggcagtcgagtatgacgccgtgggtgccatgaaggacgccgtcagggtggtcttccga
ggcccccgggtgggtgacctctttgaccgggactggcacaaggtggccctgagcatccag
gcccagaacgtctccctgtacgtcgactgtgcgctggtgcagacgctgcccatcgaggag
agggagaacatcgacatccaggggaagaccgtgatcggcaagcgcctctacgacagcgtg
cccatcgatttcgacctgcagcggattgtgatttactgtgactcccgacatgcagaattg
gagacttgctgcgatatccccctgggcccgtgccaagtgaccgtgctgacggagccttca
ccgccgcccccgcggcctcccacgcccggcagtgaacagatcgggtttttgaagaccatc
aactgctcctgcccggctggagaaaagggtgaaaagggctctgatggccccgtgggactc
cctggcccaaagggagacatgggagccactgggttgctcggagctcctggacccaaggga
gaaaaaggcgacatgggcagaggaccttttttcccaggagagaagggtgaaaagggttcc
ctgggcccgcctggtccccctgggagagacggcagcaaaggcatgcggggggagccagga
gagccaggagagccagggctgcccggcgaggtgggcatgcggggattccaaggaccacct
ggactccccgggcctcctggacacgttggagctcctggtctccaaggagaacggggtgaa
aagggagcccgaggagaaaagggggagcgaggcctggatggattccccgggaagcgtgga
gagacaggagagcagggaagacctggccctcctggtgtggcaggactccagggacagaag
ggtgacgtggggcctgcaggtcctcctggtgtcccgggctctgtggtgcagagagagggt
ctgaagggcgagcagggagctccaggaccacggggtcaccagggcccacctgggccacca
ggagctccgggcctgatgggtcctgaaggcaaggatggaccccctggtttgcaaggtctc
cgggggaagaaaggtgaagtgggcccgccgggaacccctggactgctggggccacagggc
ccaccaggaccgcctggcatcccaggcccccccggacccggaggacccccgggtttacct
ggagagatcggcttcccgggaaaacccgggcaccctgggccgacgggcacacctggaaag
gatgggcaggatggagcaccaggcctgccgggacccaagggccagccaggagacagagga
gaagacggtctgcctggaaaacccggccttaggggtgaagttggggagcagggcctggca
ggccgacctggagagaagggagcagcggggctcccaggggctcccggattcccaggcgtg
aggggagagaaaggagagcagggagagaaaggtgggctgggcctcccgggagtgaaaggt
gacccaggtgaaaagggtgaagctggtcccgcaggcccccctggattacctggcactaca
tccctcttcacaccgcacccaagaatgccaggagagcaagggcccaaaggagagaagggt
gatcctggcgtgcctggggaaccgggattgcagggccatcccggagaactggggcctcag
ggacccactggagcgccgggtgccaaaggacaggaaggcccacgcggcgcacccggatca
actggaaaccccggcgctcctggaactgtaggcccccctggtgccagcggccccccggga
agtgtgggcccccctggcatcagaggcccccctgggaaagatggagagcgtggagagaag
ggggcgacaggtgaagaagggagtccagggccagctggtcccaggggtgatcccggggtt
cctgggctcccggggacccccggacagggaaaagacggagagccggggctccgtgggcca
cctggatcacctgggcctctaggaatcaagggggaccgaggtgcacctgggatccctggc
tctcctggcaaccgtggcgacccaggcatcggagtagctggccctcctggcccttctgga
ccaccaggagacaaagggcccccgggatcccgaggcttacccggattccccggcccccag
ggaccagctggccaggatggtgtaccaggaaatccgggagaaagagggcctcctggcaag
cctggtccctcctcactgctgtctccaggggacataaatctcttggttaaggatgtgtgc
aatgactgccctccaggacccccgggcctccctggcctcccaggttttaaaggggacaaa
ggtctcccaggaaagccagggagagaaggcacagaaggcaaaaaaggagatgctgggccc
aggggcctcccagggcctccaggaatagctggaccacagggaagtaaaggggagcgtggt
gcagatggtgaaattggacagaaaggtgaccagggccatcctggagttcccggtttcatg
gggcccccggggaaccctgggccacggggagcagatggaattgccggagctgctggccct
ccagggatccaagggccgcaggggaaagaaggtcctcctggtccccaaggcccatttgga
ttaccaggaatcccaggagaagaaggcaaagagggcagagatggaaaaccaggtcccccc
ggcgagccgggcaaaatgggagagccaggtctgccaggactggagggagcccgaggcccg
cctggcttcaagggacacatgggtgactccggcgcacctggtccccggggagagcctggt
gccatggggccccctggccgagaagggtccccgggaaaagacggcgacactggacccaca
gggccccagggcccccaaggactgaggggcccaccgggtaagaacggatcgccgggatct
ccgggagaccctggtcctgcaggaagtcctggccagaagggaaacaaaggagaccatggc
agcccgggactccctggctttctgggccctcgggggcctcagggcgagcccggagacaag
ggagccccgggcaaggagggcatccctgggaagcccggagagccaggacccaaaggagac
aggggagatcccgggaacagaggtgacaaaggacctcccggtgggaagggccagccgggc
gaccctggaatccctggtcacaaaggcctcacgggcctgatgggcccccaaggaccgccc
ggggagaatggagtggctgggcccccagggcctccgggccagccaggatttccaggactc
aggggggagtccccctccgtggacacgctgcgacggctcatccaagaggagcttgagaaa
cagctggaaaccagactcgcctacctcctggcccagaggccgccggtgcacatgaagtca
tcccaaggccgacccgggcccccggggcccccgggaaaagatgggcttccaggccgagca
ggccccgtgggggagccaggacggcccgggcaggggggtctggaaggaccctctggaccc
atgggtcccaaaggtgagcgaggagccaaaggagacccaggtgcgcctggagtgggcctc
cggggcgagatgggcccgcccggcgtcccaggtcaacccggggaacctggctatgctaaa
gacgggctccccggggctcccggccctcaaggggagaccggaccagcaggacaccctggc
cccccgggaccgcccgggccccctggccagtgcgacccctcccagtgtgcctactttgcc
agcctcgctgcacggcccagtaacgtgaagggcccctag
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