Canis lupus dingo (dingo): 112665525
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Entry
112665525 CDS
T08371
Symbol
SOX5
Name
(RefSeq) transcription factor SOX-5 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
clud
Canis lupus dingo (dingo)
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clud03000
]
112665525 (SOX5)
Transcription factors [BR:
clud03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
112665525 (SOX5)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
112665525
NCBI-ProteinID:
XP_025311148
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All DBs
Position
27:22957340..23959979
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AA seq
800 aa
AA seq
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MGITQQAKSVWKMMPCFEGSKVYLCISLQEIDNIKDIGSGRDWTGRLSRMSSKRPASPYG
EADGEVAMVTSRQKVEEEESDGLPAFHLPLHVSFPNKPHSEEFQPVSLLTQETCGHRTPT
SQHNTMEVDGNKVMSSFAPHNSSTSPQKAEEGGRQSGESLSSTALGTPERRKGSLADVVD
TLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPESLAEKERQLMG
MINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINL
LQQQIQQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTM
AAAAAATPGLGPLQLQQLYAAQLAAMQVSPGGKLPGIPQGNLGAAVSPTSIHTDKSTNSP
PPKSKDEVAQPLNLSAKPKTSDGKSPTSPTSPHMPALRINSGAGPLKASVPAALASPSAR
VSTIGYLNDHDAVTKAIQEARQMKEQLRREQQVLDGKVAVVNSLGLNNCRTEKEKTTLES
LTQQLAVKQNEEGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAF
MVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDY
KYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQIPIATAGVVYPGAIAM
AGMPSPHLPSEHSSVSSSPEPGMPVIQSTYGVKGEEPHIKEEIQAEDINGEIYDEFDEEE
DDPDVDYGSDSENHIAGQAN
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcacacaacaggccaagtcagtctggaaaatgatgccatgttttgaaggaagc
aaagtgtacttgtgtatatctttacaagaaatagataacatcaaggacatcgggagtggg
agagattggacagggagactcagcaggatgtcttccaagcgaccagcctctccgtatggg
gaagcagatggagaggtagccatggtgacaagcagacagaaagtggaagaagaggagagt
gacgggctcccagcctttcaccttcccttgcatgtgagttttcccaacaagcctcactct
gaggaatttcagccagtttctctgctgacgcaagagacttgtggccataggactcccact
tctcagcacaatacaatggaagttgatggcaataaagttatgtcttcatttgccccacac
aactcatctacctcacctcagaaagcagaagaaggtgggaggcagagtggtgagtccttg
tcgagcacggccctaggaactcccgaacggcgcaaaggcagcttagctgacgttgttgac
acgttgaagcagaggaaaatggaagagctcatcaaaaatgagccagaagaaacccccagt
attgaaaagctactctcaaaggactggaaagacaaacttcttgcaatgggatcagggaac
tttggtgaaataaaagggactcctgaaagcctagctgagaaggagaggcagctcatgggt
atgatcaatcagctgaccagtctgcgggagcagctactggctgcccacgatgagcagaag
aaactagctgcatctcagatcgagaaacaacgccagcaaatggagctggccaaacagcaa
caagaacagattgcaagacaacagcagcagcttctgcagcaacaacacaaaatcaatttg
cttcagcaacagatccagcaggttcaaggtcaactgccgccattaatgattcccgtgttt
cctcctgatcaacgaacactggctgcagctgcccagcaaggattcctgcttcctccaggc
ttcagctataaggctggttgtagtgacccttaccctgttcagctgatcccaactaccatg
gcagctgctgccgcagcaacaccaggcttaggcccgctccaactgcagcagttatatgct
gcccagctagctgcaatgcaggtgtctccaggagggaagctcccaggcataccccaaggc
aacctcggtgctgctgtatctcctaccagcattcacacagacaagagcacaaacagccca
ccacccaaaagcaaggatgaagtggcacagccactgaacctatcagctaaacccaagacc
tctgatggcaaatcacccacatcacccacctctccccatatgccagctctgagaataaac
agtggggcaggccccctcaaagcctctgtcccagcagcattagctagtccttcagccaga
gttagcacaataggttatttaaatgaccatgatgctgtcaccaaggccatccaagaagct
cggcaaatgaaggagcagctccgacgggaacaacaggtgcttgatgggaaggtggctgtt
gtgaatagtctaggtctcaataactgccggacagaaaaggaaaaaacaacactggagagt
ctgactcagcaactggcagttaaacagaatgaagaaggaaaatttagccatgccatgatg
gatttcaacatgagtggagattctgatggaagtgctggagtctcagaatcaagaatttat
agagaatccagagggcgtggtagcaatgaaccccacataaaacgtccaatgaatgccttc
atggtgtgggctaaagatgaacgaaggaaaatccttcaagcctttcctgacatgcacaac
tccaacatcagcaagatattgggatctcgctggaaagctatgacaaacctagagaaacag
ccatattatgaagagcaagcccgtctcagcaagcagcacctggagaagtaccccgactac
aaatacaagcccaggccaaagcgcacctgcctcgtggatggcaaaaagctgcgcattggt
gaatacaaggcaatcatgcggaacaggcggcaggaaatgcgacaatacttcaatgttggg
caacaagcgcagatccccatcgccactgctggtgttgtgtaccctggagccatcgccatg
gccggaatgccctcccctcacctgccctcggagcactcaagcgtgtccagcagcccggag
cctgggatgcctgttatccagagcacttatggtgtgaaaggagaggaaccacatatcaaa
gaggagatacaggctgaggacatcaatggagaaatttatgatgagttcgatgaggaagag
gatgatccagatgtagattatgggagtgacagtgaaaaccatattgcaggacaagccaac
tga
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