Corynebacterium lujinxingii: IAU68_04385
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Entry
IAU68_04385 CDS
T07743
Name
(GenBank) ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
cluj
Corynebacterium lujinxingii
Pathway
cluj03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cluj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
IAU68_04385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cluj03400
]
IAU68_04385
Enzymes [BR:
cluj01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
IAU68_04385
DNA repair and recombination proteins [BR:
cluj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
IAU68_04385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
DNA_primase_S
mRNA_cap_enzyme
KATNA1_MIT
Motif
Other DBs
NCBI-ProteinID:
QNP91005
UniProt:
A0A7H0K139
LinkDB
All DBs
Position
867897..870188
Genome browser
AA seq
763 aa
AA seq
DB search
MASDQKVRVGGRELTVSNLDKVLYPETGTTKADVMRYYLAVADVLIPQARLRPITRKRWP
EGVGADSFFRKDLEDSAPEWIPTGEIQHTTSVNAYPLLDDPATLAWLAQVAALELHAPQW
RFGADGKPQNPDRLVLDLDPGPGVELHDTAEVALMCREILEDMGLTCVPVTSGSKGIHLY
AGLDGTSDADAVSQVAKTLAQHLQREHPKRITATMAKAQRDGKVFIDWSQNNGKKTTVCP
YSLRGRARPTVAAPRTWEEIASNDLAQLEFDEVIRRVEDGIDPIAALGAPGEDRLATYRS
MRDKTKTGEPVPDAAPSPRNGEPIFVIGEHDASHLHWDFRLEHDGVLVSWAVPKGPPLST
DLNRLAVQTEDHPIEYAEFEGTIPKGQYGAGTVKIWDIGTCEIEKWRDNEIIAVLQGRSD
GGLGGVPRRFVLIRTNDNSWLLRLKHDQPKTEAKSKPELAPMLPTNATRGDITLDEQDGA
TFAFEMKWDGYRILAESSGGIRLRSRGGKDYTDLFPHTDEFEQMLDDDTVADGELIAVGP
DSTPDFSLLHKVDRHGSDDTAELRYMVFDLLRLRGRDLTGEPWETRRELLEQLDPTDHVV
IPPAYRGSFDNAWKAAGELGLEGVVAKHVRSVYEPGRSEKWLKVKRALHQEVVVVGVRTG
KRGIASLLVAVPDEVGTLRYAGRVGTGFSNAQLDQIGKKLRRIERKTPAVDVPQSDAKDA
WWVTPKYVAEVQLAGKTRDNKVRQASWRGWRDDKDPNEVRWEV
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcgaccaaaaggtccgcgtcggcggccgcgaactgaccgtaagcaacctggac
aaggtgctctacccggaaaccggcacgaccaaagcggacgtgatgcgctactacctcgcc
gtggccgacgtgctcatcccgcaagcgcgccttcgcccgatcacgcgtaaacgctggccc
gaaggcgtcggcgcggacagcttcttccgcaaagacctcgaagactccgcgccagaatgg
atccccaccggcgaaatccagcacaccaccagcgtcaacgcgtatccgcttctcgacgac
cccgccaccctggcatggctcgcccaagtcgcagccctcgaactgcacgccccacagtgg
cgcttcggcgcagacgggaaaccgcaaaaccccgaccggttggtgctcgatctggacccg
ggtccgggcgtggaattacatgacaccgccgaggttgcgctcatgtgccgcgagatcctc
gaagacatgggactgacctgcgtgccggtaacctccgggtcgaagggcatccacctctac
gccggtctggatggcacaagcgacgcagacgcagtgtcgcaggtggcgaaaacgctcgcg
cagcacctacagcgcgagcacccgaagcgtattaccgcgaccatggccaaagcccagcgc
gacggcaaagtgttcatcgactggagccaaaacaacgggaagaagaccaccgtgtgtccg
tactcgctgcgcggccgtgcccgcccgaccgtcgccgcgccgcggacgtgggaggaaatc
gcctcgaacgacctcgcgcagctggagttcgacgaggtcatacggcgcgtcgaagacggc
atcgacccgatcgcagccctcggcgcgccgggcgaggaccggctcgcgacctaccgatcc
atgcgcgacaagaccaagaccggcgagcccgtgccggatgcggcgccctcgcccaggaac
ggcgagccgatcttcgtcatcggcgagcatgacgcctcgcatctgcactgggattttcgc
ctcgagcacgacggcgtgctcgtctcctgggcggtgccgaaaggcccgccgctgtccacg
gacctcaaccggttggcggtgcagaccgaggatcacccgatcgaatacgccgagttcgaa
ggcaccatcccgaagggtcagtacggcgcgggcacggtaaagatttgggacatcggcacc
tgtgagattgaaaagtggcgcgacaacgaaatcatcgccgtgctgcaggggcgtagcgac
ggcggcctcggcggcgtgccgcgccgcttcgtcctcatccgcacaaacgacaacagctgg
ttgctgcggctgaagcacgaccagccgaaaaccgaagctaaaagcaaacctgaactcgcg
ccgatgctgcccaccaacgccactcgcggcgacatcaccttggacgagcaggacggcgcc
actttcgccttcgagatgaagtgggacggctaccgcatcctcgccgaatcgtctggcggc
atccgcctgcgcagccgcggcggcaaggactacacggacctcttcccgcacaccgacgaa
ttcgagcagatgcttgacgacgacaccgtcgccgacggcgaactcatcgccgttggcccc
gacagcacgccggatttctcgctgctgcacaaggtggaccgccacggtagcgacgacacc
gccgaactgcgctacatggtcttcgacctgctgcgactgcgcggccgcgacttgaccggc
gaaccgtgggagacccggcgcgaactgctcgagcagcttgaccccacagatcacgttgtc
attccgccggcgtaccgcggctcctttgacaacgcatggaaagcggcgggtgagttgggg
cttgagggtgtcgtcgctaagcacgtgcgttcggtgtacgagccggggcgcagcgagaag
tggctgaaggtcaagcgtgcgctgcaccaggaggttgtggtggtcggcgtgcgcaccggc
aagcgggggattgcgtcgctgctggtcgcggtgccggatgaagtcggaacgttgcggtac
gcggggcgcgtgggcacggggttttcgaacgcgcagctggatcagatcggcaaaaaactg
cgccgcatcgagcgcaaaacacccgccgtggatgtgccccaatccgacgcgaaagatgcg
tggtgggtcaccccaaagtacgtcgctgaggtgcagttggcgggcaagacgcgggataac
aaagtgcgccaggcctcgtggcgaggctggcgcgacgacaaggacccgaatgaggtccgc
tgggaggtctag
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