Corynebacterium lujinxingii: IAU68_04735
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Entry
IAU68_04735 CDS
T07743
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cluj
Corynebacterium lujinxingii
Pathway
cluj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cluj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IAU68_04735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cluj03019
]
IAU68_04735
03009 Ribosome biogenesis [BR:
cluj03009
]
IAU68_04735
Enzymes [BR:
cluj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
IAU68_04735
Messenger RNA biogenesis [BR:
cluj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IAU68_04735
Ribosome biogenesis [BR:
cluj03009
]
Prokaryotic type
rRNA helicases
IAU68_04735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
adh_short
Motif
Other DBs
NCBI-ProteinID:
QNP91067
UniProt:
A0A7H0K1A1
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All DBs
Position
943722..945809
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AA seq
695 aa
AA seq
DB search
MSISENATGGEKKPDTNVSENQENPQDVAAEIVEAVVEDTRDAEIADTTGAADDAAAIDV
EDDVVKVTEPAEAAEAAEAAEPEAKGEPENGFETLGLPDKVIEAVKRVGFEQPSPIQAQT
IPLLMEGRDVVGLAQTGTGKTAAFALPVLSQIDPKQRHPQALVLAPTRELALQVSDSFQS
FADHLGGVNVLPIYGGQAYGIQLSGLRRGAQVIVGTPGRVIDHLEKGSLDISNLRFLVLD
EADEMLNMGFQEDVERILEDTPENKQVALFSATMPNAIRRISRDYLNNPEEVTVKSETRT
NTNIRQRYLFTAHRNKLDAITRILEVTEFEAMIVFVRTKNETEEIAEKLRARGFSAAAIN
GDIAQQQRERTVDQLRDGRLDILVATDVAARGLDVERISHVLNYDIPNDTESYVHRIGRT
GRAGRSGEAILFVTPRERRMLRSIERVTNATIEEMDLPTVDEVNESRKANFMDSITESLE
ASDLQIFKTMVREYSATNNVPMDDIAAALATQALAGDEFLMKEPPRDKRDRRDRFDRDDR
RGRDRRDRFDRDDRGRGRRHNDNENFDTYRLDVGKRQHVRPGAIVGALANEGGLSSKDFG
RITIGGDFTLVELPKNLDQAVLDRLEDTRISGQLINIQRDHGAPPRDRGGRGGRGGYRGG
RDRDDHGGRGRGGYRGGRGRDRDDRGGRGRGGYRD
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgagcatttccgaaaacgccaccggcggcgagaagaagccggatacgaatgtgtcggaa
aatcaggaaaatccgcaggatgtcgcggccgaaatcgttgaggccgtagtagaggacacc
agggatgcggagattgctgataccaccggcgccgcggacgatgccgcggccattgacgtt
gaagacgacgtggtaaaggtgaccgagccggccgaagctgctgaggctgctgaggctgcg
gagccggaggctaagggggagccagagaacggcttcgagaccctcggcctgccggacaag
gtgatcgaggccgtcaagcgcgtcggctttgagcagccctcgccgattcaggcgcagacc
atcccgctgttaatggaaggccgcgacgttgtcggcctcgcgcagacgggtaccggcaag
acagcggcgttcgcgctgccggtgctgtcccagatcgacccgaagcagcgccacccccag
gcgctcgtgctcgcgccgacgcgcgaactcgcgctgcaggtgtccgactccttccagtcg
ttcgccgaccacctcggcggtgtgaacgtgctgccgatctacggcggccaggcctacggc
atccagctctcggggttgcgtcgtggcgcacaggtgatcgtcggcacgccggggcgtgtg
atcgaccacctggagaagggctcgctggacatctccaacctgcgcttcctcgtgctcgac
gaggcggacgagatgctcaacatgggcttccaagaagacgtcgagcgcatcctcgaggat
acgcccgagaacaagcaggttgcactgttttccgcgacgatgccgaacgcgatccgccgc
atctcgcgcgactacctgaacaacccggaagaggtcaccgttaaatcggagacccgcacc
aacacgaacattcgccagcgctacctgttcacggcgcaccgcaacaagttggacgcgatc
acccgtatcctcgaggtgaccgagttcgaggcgatgatcgtgttcgtccgcacgaagaac
gagacggaagaaatcgccgagaagctgcgcgcccggggtttctccgccgctgccatcaac
ggcgacatcgcccagcaacagcgtgagcgcaccgtcgaccagcttcgcgacggccgcctg
gacatcctcgtggccaccgacgtcgccgcccgcggcctggacgtcgagcgcatctcgcac
gtgctcaactacgacatcccgaacgacaccgagtcctacgtgcaccgcatcggccgcacc
ggccgcgcgggccgctccggcgaggcgatcctcttcgtcaccccgcgcgagcgccgcatg
ctgcgctccatcgagcgcgtgaccaacgcgacgatcgaagagatggacctgccgactgtc
gacgaggtcaacgagtcgcgcaaggcgaacttcatggactccattaccgagtcgctcgag
gccagcgacctgcagatcttcaagacgatggtgcgcgagtactcggcgacgaacaacgtg
ccgatggacgacatcgctgctgcgcttgccacccaggcgttggccggcgacgagttcctg
atgaaggagccgccgcgcgacaagcgtgaccgtcgcgaccgtttcgaccgcgacgaccgc
cgtggccgtgaccgccgtgatcgcttcgaccgcgacgaccgcggtcgtggacgtcgccac
aacgacaacgagaacttcgacacctaccgtcttgatgtgggcaagcgtcagcacgtgcgc
ccgggtgcgatcgtcggcgcgctggcgaacgagggtggtctgagctcgaaggacttcggc
cgtatcaccatcggtggcgacttcaccttggtggagctgccgaagaacctcgaccaggcg
gtgctcgaccgactggaggacacccgcatctccggtcagctgatcaacattcagcgcgac
cacggtgccccgccgcgcgatcgcggtggacgcggcggccgaggcggctaccgcggcggc
cgtgaccgcgacgaccacggcggacgcggacgtggtggctaccgcggtggacgtggccgt
gaccgcgacgaccgcggcggacgcggacgcgggggataccgcgactaa
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