Cyclopterus lumpus (lumpfish): 117727189
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Entry
117727189 CDS
T09199
Symbol
gtf2a1
Name
(RefSeq) transcription initiation factor IIA subunit 1 isoform X1
KO
K03122
transcription initiation factor TFIIA large subunit
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117727189 (gtf2a1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clum03021
]
117727189 (gtf2a1)
Transcription machinery [BR:
clum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIA
117727189 (gtf2a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIA
Motif
Other DBs
NCBI-GeneID:
117727189
NCBI-ProteinID:
XP_034383201
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Position
24:19885747..19894790
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AA seq
432 aa
AA seq
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MLICQGETESTPTWFVRHVMFSCCYGSCAALLLTDVFLLHISETPYVYVKPKLYKSVIED
VINEVRELFLDEGVDEQVLLELKTLWENKLLQSKAVEGFHTEEQALQAAQQQVQHQVQQV
QQVQQVHHVTQPAQTQQVILPPQQQQAPQQQVIVQDSKMLQHMSATGMSAAATAATLALP
TGVTPYQQLITSQGQILQVVRAPNGAQYIIQPQQQILLQQQMQPGGVQAPVIQQVCPIRQ
VLTPLQGGLPQQTGVIIQPQQIVLASGNKGNTQVMQAAALAQQPIQAATAQAQQVQQVQQ
VQQAQQAQQAQGTAAPQVPPQPQAPMILQADGTGDTSSEDDEDEEEYDEDEEEEKDKDGG
EDGQVEEEPLNSGDDVSDEEDQELFDTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRD
YVFSKAIGDAEW
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcttatctgtcaaggggaaactgaatctacacctacatggtttgtcagacatgtaatg
tttagctgctgttatggcagctgtgcagcactgttgttaactgatgtcttcctattgcac
atttcggaaacgccatatgtctatgtaaaacctaaactctataagtctgtgattgaggat
gtgatcaacgaggtgcgggagctgttcctggatgagggagtggatgagcaggtgcttctg
gagctgaaaacgctgtgggaaaacaaactgttgcagtccaaggcagtggagggcttccat
actgaggagcaggccctgcaggccgcccaacagcaggttcagcaccaggttcagcaggtc
cagcaggtccaacaagtccaccatgtgacccagccggcacagacccagcaagtcattctg
ccccctcagcagcagcaagctccccagcagcaagttattgttcaagattctaagatgcta
cagcacatgagtgcaacagggatgagtgcagcagctacagcagcaacccttgctttgccc
acaggggtcaccccataccaacagctcatcaccagccaaggtcagatcctgcaggtggtc
cgtgctcccaacggggctcagtacatcatccagccccagcagcagatcctcctgcagcag
cagatgcagcctggtggcgtgcaggccccggtcatacagcaggtatgccccattagacag
gtcctgactcctctgcagggaggcctgccccagcaaacaggagttatcatccagccgcag
cagattgtcttagcttcaggaaacaaaggcaatacacaggtgatgcaggcagcagctctg
gcgcagcagccgattcaggcagcaacagctcaggcccagcaggtccagcaggtccagcag
gtccagcaggcccagcaggcccagcaggcccagggtacagctgcaccacaggtcccaccg
cagccacaggcacccatgatacttcaggcggacggcaccggagacacctcctcagaggac
gacgaggatgaggaggagtatgacgaagatgaagaggaggagaaggacaaggatggggga
gaggacgggcaggtggaagaggagccactgaacagtggtgatgatgtcagtgatgaggag
gaccaggagctgtttgatacagagaatgtagtggtgtgccagtatgacaagattcacaga
agtaagaacaaatggaaattccacctgaaggacgggatcatgaatctgaatgggagagat
tatgtcttttccaaagccattggggatgctgaatggtga
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