KEGG   Cyclopterus lumpus (lumpfish): 117727770
Entry
117727770         CDS       T09199                                 
Symbol
crnkl1
Name
(RefSeq) crooked neck-like protein 1
  KO
K12869  crooked neck
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117727770 (crnkl1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:clum03041]
    117727770 (crnkl1)
   03036 Chromosome and associated proteins [BR:clum03036]
    117727770 (crnkl1)
Spliceosome [BR:clum03041]
 Complex B
  Other components
   Prp19-related factors
    117727770 (crnkl1)
 Complex C
    117727770 (crnkl1)
Chromosome and associated proteins [BR:clum03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     117727770 (crnkl1)
SSDB
Motif
Pfam: HAT TPR_14 TPR_19 Suf U3_assoc_6 Mad3_BUB1_I
Other DBs
NCBI-GeneID: 117727770
NCBI-ProteinID: XP_034384117
Ensembl: ENSCLMG00005011783
LinkDB
Position
24:2280677..2291479
AA seq 763 aa
MASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPKQKITDEEELND
YKLKKRKGFEDNIRKNRTVISNWIKYAQWEESLKEILRARSIYERALDVDHRNITLWLKY
AEMEMKSRQVNHARNIWDRAITILPRVNQFWYKYTYMEEMLGNVAGCRQAFERWMEWEPD
EQAWHSYINFELRYKEVDKGRTIYERFVIVHPEVKNWIKYARFEEKHGYIAHSRKVFERS
VEFFGEDHVEENLFVAFAKFEEAQKEFERVRVIYKYALDRIPKQQAQELFKFYTMFEKKF
GDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVENDADSDTVREVYERAIANIP
PIQEKRHWKRYIYLWINYALYEELEVKDPEKTRQVYQASLDLIPHKKFTFAKIWLLYAQF
EIRQKNLQGARRVMGTAIGKCPKNKLLKGYIELELQLREFDRCRKLYEKYLEFSPENCTT
WIKFSELETILGDVERARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEDFENTRTLYKRL
LQRTQHVKVWISYAKYELSINSSERLQKCRQILEEANKGMRNCEEKEERLMLLESWRDFE
REFGSESSMERVRKLLPDKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMA
KMWKRQQMVDEDGDEDGGNEDRGDEDGGNEGEENGDGGEKSPEEAEETDEPAAAPENRPE
RNAEETETTGADRDDEGSSSDSDDGGKKKEEEKESKSGEEDKE
NT seq 2292 nt   +upstreamnt  +downstreamnt
atggcgtccaccgcggcgggcaaacagcggatcccgaaggtggcgaaggtgaagaacaaa
gctcccgctgaggttcagatcacagccgagcagctgctgagggaagccaaggagcgggag
ctggagctgctgccgccgccgcccaagcagaagatcacggacgaggaggagctgaacgac
tacaagctcaagaagaggaaggggtttgaggacaacatcagaaagaaccggaccgtcatc
agcaactggatcaaatacgcacaatgggaggaaagcctgaaggagatattgagggcacgc
tccatctacgagcgagcgctggacgtcgaccaccgcaacatcacactgtggctgaagtac
gccgagatggagatgaagagccgacaggtgaaccacgcccgcaacatctgggaccgagcc
atcaccatcctcccccgagtcaaccagttctggtacaagtacacctacatggaggagatg
ctgggcaacgtggccggctgcaggcaggcgttcgagcgctggatggagtgggagcccgat
gagcaggcctggcactcctacatcaacttcgagctgcgctacaaggaagtcgacaaagga
cgcaccatttatgagcgattcgtcatcgttcaccccgaagtgaagaactggatcaagtac
gctcgcttcgaggagaagcacggctacatcgcccacagcaggaaggtgttcgagaggtcg
gtcgagttcttcggagaggaccacgtggaagaaaacctcttcgtggccttcgccaagttt
gaggaggcgcagaaggagtttgaacgcgttcgggtgatctacaagtacgcgttggaccgg
atccccaagcagcaggcgcaggagctcttcaagttctacaccatgttcgagaagaagttc
ggagaccggcgggggatcgaggacgtcatcgtcagcaagcggaggttccagtatgaggag
gaggtcaaggcgaaccctcacaactacgacgcgtggttcgattacctccgcctggtggag
aacgacgccgactccgacacggtccgggaggtttacgagagggccatcgccaacatccca
cccatccaggagaagaggcactggaagcggtacatctacctgtggatcaactacgctctg
tacgaggagctggaggtcaaggatccagagaaaacgaggcaggtgtaccaggcctctctg
gacctcatcccacataagaagttcacgttcgctaagatctggctgctttacgctcagttt
gagatccggcagaagaacctgcagggagccagacgggtcatgggcacggcgatcgggaag
tgcccgaagaacaagctgctgaagggctacatcgagctggagctgcagctgcgggagttc
gaccgctgcaggaagctgtacgagaagtacctggagttcagcccggagaactgcaccacc
tggatcaagttctccgagctggagaccatcctgggcgacgtggagcgggcccgcgccatc
ttcgagctcgccatcgggcagccgcggctggacatgccggaggtgctgtggaagtcctac
attgactttgagatcgagcaggaggactttgaaaacacccggacgctctacaaaaggctg
ctgcagcgcacccagcatgtcaaggtctggatcagctacgccaagtacgagctgtccatc
aacagctccgagcggctgcagaagtgccggcagatcttggaggaggccaacaagggcatg
aggaactgcgaggagaaggaggagcggctgatgctgctggagtcctggagggactttgag
agggagttcgggtccgagagctcgatggagagggtgaggaagctgctgccggacaaggtg
aagaagaggaggaagctgacggccgaggacgggtcggacgccggctgggaggagtactac
gactacatcttcccagaggacgccgccaaccagcccaacctcaagctgctggccatggcc
aagatgtggaagaggcagcagatggtggacgaggacggcgacgaggacggaggaaacgag
gacagaggagacgaggacggaggaaacgagggcgaagaaaacggcgacgggggcgagaaa
agtcccgaggaggccgaagagacggacgaacccgccgccgctcctgagaaccggccggag
agaaacgccgaggaaacggagacgacgggcgccgatcgggacgacgaaggcagcagcagt
gacagtgatgatggagggaagaaaaaggaggaggagaaggagagcaagagtggagaggaa
gataaagagtag

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