Cyclopterus lumpus (lumpfish): 117729150
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Entry
117729150 CDS
T09199
Symbol
lcorl
Name
(RefSeq) serine/arginine repetitive matrix protein 2 isoform X1
Organism
clum
Cyclopterus lumpus (lumpfish)
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Gene cluster
GFIT
Motif
Pfam:
DUF4553
ORC3_N
Motif
Other DBs
NCBI-GeneID:
117729150
NCBI-ProteinID:
XP_034385810
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Position
1:complement(3461829..3481741)
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AA seq
1979 aa
AA seq
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MATVQCCKCTAERKGFRRELDSWRHKLIHCVGFESILEGIYGPLLLRDLNLFDDCEPEEV
GDWSSETSCSQCSFCNLSLDKLSSDHLPAATSPLSSPSDYSPCQAPTISESSQSAQRILQ
AVFHKKDASLGCDFNIPPVAQELMKKMIHQFALEYASKCLLHTSTNGVTTRTSSPLPQPS
DAPLDLTVSQTGEESESDPDGVLDLSNRNTACSATSSTPSSHKAGSLSPSCVEELGDLGQ
RGTTGHQSSALGAVLSSLCSAHRSLLYQILKLAHQEKLLNHRPVGQTESHCCHCGVNPQD
VVSPNTVPFSECKAHNSSPYLPLIDCDNQGHGSTTCRPGDSKSNCSIHHCPLTDCKSDAP
LCSSYCCVQSCSMETYTVMCPERLHCISCQRLAVGRIDNIVCSFASSPSLSKSPSLRTSS
FFPSSSICCNQHNPHCCPGHSNKACLTQFRNTIERGVGDGDPPCPVLRREQSPSPPLSPM
PSDVNKKTDEKPPSLLHHRQEEEADLMVKDGLGNASHQEADVDTAAEGERYRTPRSSPAE
QNPSGTSLQDVVNRFSEKLETIEPIEKDPPLVATAVNVSEKEKQPCPSTSQNRQCQADAH
LTEIITTVLHTGSASDYNLSELFNRHDSNEPKSPNTRSRRRQEVLAAIATPADDASTRRQ
TLQIKRELAMFDQCYSRRKVPLAKRARLKDGNVTVTKPPTSSDSNLVKEDSNSKMEVGLE
PVENHRAQEGPMDILTAKTERDEVKEEIQPGILTEEVQIIKAEEKEREISGEEKYLTLSD
AQISAPELQRKYGKQDSKGDNVRTQVTTVSAASANWYSRPCKEDGIGSDPEGDGCHEEAP
PGQSSDSDDRPGTGKDCHSPVRDGQTCQPHHSEDTRRSRRNIVPPQRFSSYVTEPWKKYY
VGCFPESILNQETQMDKVLTSSSPGALSKDPDAEDIQFESRSEAPLSSPEHAWKHTFGST
RGEQSGPPYNESKCLSTNQVFPQTMAAKDTSPTKQSLDDETDGSDCAAKPFGRLRSSPKR
LQGSKATSRTPQHPSNTDVPMTSAGCVKSLPNSQVQYTSPIKLMFFSPVKDKEGVRYSLK
SAYSGSSAQEPFDPCIEASWSGTLKKQKSQRTEPVTSRVKSISSPLNSATSPARSASTAK
SASPAKSASSPKSASSSPKSASLLAKSASSPAKSASSPAKSASSPAKSASSSPKIGSRRS
GEGTPTKRGAESQRSPGDSISFHETTPKRRPGRPKKLGPQLEQKAKRPIGRPRKEKAVDS
VMGAKTGDGKSVTASEVEENVNKNLKITVVYGRSRRNKRMVSEGFDQLQTEFHDAWQAVG
LKGDLGILMHNSKTSSGNIKAASTELPEELNLVGPVKESAPPSSSNLKCQKRDDSAPSRK
PGRPAKVKISGISVTVTTVSPRQRKIQINKDTLQSPETPVHRKVLLPEFKSAKEPWTVSR
QSTSKIRQTEEGVEAEEESKGKPQNQPVAVRHSMRVRKPSIHFLHAVATSRSYSHSNALL
RRSKQLLLNKANNERRQGEHQSGVEMSREKRRLCGPERNNISQDLSRVAGVSVNSIFTSK
ETLRWWAASAEEPTMNQELARRIRLISDTWVSNTVENQEKEPALKSNLCTKGNGSFTRNS
KHSSVRMLFDCPPNTPRSCSMQQLCSWYMQTTETQSLAIVKKTSSRNPYEFMHFPRSFNK
TSVCPSPQAERLRKHIKKFAKTVPKSPLQHQRAQKRLRKRHEAPLPTHKIRRRLFTPGCA
TGRLSHGALWWRRDLGKYRTTLCRARTRFLTRKERKRWRKRQRDKNIKVAPSCSNGHVAT
GPQPKRRSLRRSAKDPLSDHLENSSGDQTLEPVDATKEQNLCSKAWSPETLKECRVFLRK
INSPDNESAEEEWDSCTVTLDNGSPSAYLFAGRERELVGVVKAVKTDRKRSTASMELPSS
EPKSVQEPEEMPAGRQKGKHRSPGVVSTESPQPPPAKTLRQSRMRGLTGPRWCDFVFEN
NT seq
5940 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgtgcagtgctgcaaatgcacggccgaaaggaaagggtttcggcgggaactt
gattcttggcgacacaaactgatacactgcgtcgggtttgaaagcattctggagggaatc
tatggcccactgctgctgagggacctcaatttatttgatgactgtgaacctgaagaggtg
ggcgactggtcctctgaaacaagttgctctcaatgctcattctgcaacctttccctggac
aaactcagcagtgatcatctacctgcagccacgtcgcccctttcctccccctctgattac
tctccctgtcaggctccaaccatctctgagagcagccaatcagcgcagaggatcctccaa
gctgtgtttcacaaaaaagatgcgtccctgggctgtgatttcaacatccctccggttgct
caggagctaatgaagaagatgatacatcagtttgccttggagtacgcatccaagtgccta
ctccacaccagtacaaatggtgttacaacaaggacctcatcacctttgccacaaccatca
gacgcccctctggacctcacagtgagccaaactggggaggagagtgaaagtgacccggac
ggcgtgctcgacctctccaacaggaacactgcgtgctcagcaacttcatcaacaccatct
agtcacaaagccggctccctgtcgccatcatgtgtggaagaattgggtgatctgggacag
cgagggactacgggtcatcagagctcggcattgggcgctgttctcagctcgctctgctca
gcacaccgttccttactctaccagatcctgaagctggcgcaccaggaaaaattgcttaat
cacagacctgtaggtcaaactgaatctcactgctgtcactgtggtgtaaacccacaggat
gttgttagccccaacacggtcccatttagtgaatgtaaagcccataacagcagcccgtac
ctccctttaattgattgtgataatcaaggtcatggcagcacaacgtgtcgtccaggagac
tccaagtccaactgtagcatccatcactgccctttaacagactgtaaaagtgacgctcct
ctgtgctcaagctactgctgtgtgcagagctgcagcatggaaacctacactgttatgtgc
cccgagaggctgcactgcatttcctgccaacggcttgctgtaggccgtatcgacaacata
gtgtgttcgtttgcatcttctccttcgctatccaaatctccttcgctgcgcacctctagt
tttttcccttcctcatcgatctgctgtaaccaacacaacccccactgttgccccggtcat
tcaaacaaagcttgtctgacgcagttcaggaacacaatagaaagaggggttggagatggc
gatcccccttgtcctgtcctgaggagagaacagagcccctctcctcctctgtcccctatg
ccatcagatgtcaataagaaaaccgatgaaaagccaccctccctccttcaccatagacaa
gaggaggaagctgacctaatggttaaagatggtcttgggaatgcaagccaccaagaagca
gatgtggacacagctgcagaaggggagcgatatagaaccccaagaagtagtccggctgag
cagaacccaagtggaacgtcactgcaagacgtcgtgaatcgcttcagtgagaaactggag
acaatcgaacctatagagaaggatccacctcttgttgctacagctgttaatgtctctgaa
aaggagaagcagccatgtccctcaaccagtcagaaccggcagtgtcaggctgacgctcat
ttgactgaaatcatcaccaccgtgcttcatacaggcagcgctagtgactacaatctcagt
gagctgttcaatcgccatgatagcaacgagcctaagtcacccaacacccgctcccgacgt
cgccaagaagtccttgctgctatagcaacacctgctgacgatgcttcaaccagaaggcaa
accttacaaattaaacgagagcttgccatgtttgaccagtgctacagtaggagaaaggta
ccactagcaaagagagcaagattgaaagatggaaacgttaccgtaactaaaccacccact
tcatcagattcaaacctagttaaagaggactctaacagcaaaatggaggtaggtttagaa
cctgtagagaatcatagagctcaggagggaccaatggacattctcactgcaaaaacagaa
agggatgaagtaaaagaggagatacagccaggtatactaacagaagaagttcagatcatt
aaagcagaggagaaagagagggaaatatctggtgaggaaaaatatcttaccctctcagac
gctcaaatatcggcccctgagctgcagagaaagtatggcaaacaagactcaaagggtgac
aatgtacgaacacaggtgacgacagtgagtgcagcctcagcaaactggtatagcaggccc
tgtaaggaagatggtataggtagtgatcctgagggtgatgggtgccatgaagaagcccca
cctggtcaaagctctgacagtgacgatagaccaggtacgggtaaagattgccacagtcct
gttagagatggccagacatgtcaaccacaccactcggaggacacaaggagatccaggaga
aatatagtgcccccacagcggttctcctcttatgtcacagaaccctggaagaagtactat
gttggatgtttccctgaaagcatccttaaccaggaaacacaaatggacaaggttttgaca
tctagctccccgggtgccttatccaaagatccagatgctgaggacatccagtttgaatcg
agaagtgaagcccctctgtcctcacccgagcacgcatggaagcatacctttggatcaaca
cgtggagaacaaagtgggccaccctacaatgagtcaaaatgtctttctacaaaccaggtc
tttccacaaactatggctgccaaagacacaagtcctacaaaacagagcttagacgacgag
acagatggcagcgactgtgctgccaagccttttggaaggctacggtcatctccaaaaaga
ctacagggctccaaggcaacttcaagaaccccccaacacccatcaaatacggatgtcccc
atgacgtctgctggctgtgtaaagagccttcccaactcccaagtccagtacactagtccg
ataaagctcatgttcttttctccagtaaaggataaagagggggttagatacagtctcaaa
tcagcatattcaggttctagtgcacaggaaccctttgacccatgtatagaagcgtcatgg
tcagggacacttaagaaacaaaaaagccagagaactgagcctgtcacttcacgagtaaag
tctatttcttcaccactaaattctgctacctcaccggcaagatctgcttcaacggccaag
tccgcctcaccggccaagtcagcttcttctcccaagtcggcgtcttcatcacccaaatct
gcgtctttgctcgccaagtctgcgtcttcacctgccaagtctgcgtcttcgcctgccaag
tctgcgtcttcgcctgccaagtctgcttcgtcatcacctaaaataggctccagaagatca
ggcgaaggtactccaactaagcgtggcgccgagagccagagatcaccaggcgactcgata
tctttccatgaaaccactccaaaaaggcgtccgggtcggccaaagaagctgggaccacag
cttgagcaaaaggcaaagaggccaatcggtcgaccacgcaaagagaaggcagtggactcc
gtaatgggggcaaaaacaggagatggaaaatctgttacagcatctgaagttgaggagaat
gtgaacaagaacctgaaaataacagtagtgtatggccgttcaaggcgaaacaaacgcatg
gtgtctgagggctttgaccagctgcagacagaattccatgatgcttggcaagcagtgggc
ctaaaaggtgacttgggcattttaatgcacaactctaagaccagctcaggtaatatcaaa
gcagcctcaacagaattgcccgaggaattaaatttagtcggccctgtaaaagagtctgcc
cccccatctagcagtaacctcaaatgtcaaaagagggatgattctgcaccctcaaggaaa
ccaggtagacctgcgaaagtaaaaatctctgggatctcagtcacagtcaccacagtgtca
cctcggcagcgtaaaattcagataaataaggatactctgcagtctcccgaaacaccagtt
cataggaaagtactcctaccggaattcaaatctgccaaagagccctggacagtcagtcgg
cagtcaacgagcaaaatccgtcaaacggaagaaggggttgaagcggaagaggaaagtaaa
ggcaaaccccaaaatcagcctgtagcagtgcgtcactcgatgagagtgagaaagccctcg
atccactttctgcacgccgttgccacctctagatcatacagccacagtaatgctctgcta
cggcgctccaaacaacttctgctgaacaaggccaacaatgaaaggagacagggggagcac
cagagtggtgtggagatgtcgagggagaagaggcggctctgtggaccagaaagaaacaac
atctctcaggacctgagcagagtggcaggcgtgtctgtgaactccatctttacctcaaaa
gagacactacggtggtgggcagcatcggccgaggagccgacgatgaaccaggagctcgcc
aggcgaatacggctcatctctgacacgtgggtctcaaacactgtggagaaccaagaaaaa
gaacccgccttaaaatcaaatctctgcactaaaggcaacggttcattcaccaggaattcc
aaacattcctctgtccgaatgctgttcgactgtcctccgaacacgcccaggtcctgcagc
atgcagcagctctgctcctggtacatgcagaccacagagacacagtctctggctatcgtc
aagaagacgagctcccgtaatccttatgaattcatgcacttccctcgttctttcaataag
acgagtgtttgccccagccctcaggcggagcgactccgcaaacacatcaagaaatttgct
aaaactgtgccaaaaagtcctctgcaacaccaacgggctcagaaaaggttgaggaagaga
catgaggcgcctctaccgacgcacaagatcaggcgacgacttttcactcccgggtgtgca
acgggcaggctcagtcacggagcactatggtggagaagagaccttggcaaataccggaca
actctatgtagagcgaggaccaggttcctaacccgaaaagaaaggaagaggtggcgaaag
aggcagagggataaaaacatcaaagtagctccaagttgttcaaatggacacgtcgcgact
ggaccgcagccaaagcgtagatccctacgcagatcagcaaaagatccgttatctgaccat
ctggagaacagttctggtgaccaaactctggagcctgtggatgcaaccaaagagcagaac
ctctgctctaaagcctggagtcccgagacactgaaggaatgccgtgtgtttctgaggaag
atcaactccccagacaacgagtccgctgaggaggagtgggactcctgcaccgtgacactg
gacaacgggtccccttccgcttacctctttgcaggaagggagagagaactggtgggggtt
gttaaagctgtgaaaaccgacagaaaaaggagcaccgcctcaatggagctcccgagttct
gaacctaaatcagtccaggagccggaggagatgccggcggggaggcagaaaggcaaacac
agaagtcccggggttgtgtcgaccgaatcaccgcaacctcctcccgcgaagacgttgaga
caatcgcggatgaggggcctcaccgggccacggtggtgcgactttgtgtttgaaaactaa
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