Cyclopterus lumpus (lumpfish): 117729308
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Entry
117729308 CDS
T09199
Symbol
sec22bb
Name
(RefSeq) vesicle-trafficking protein SEC22b-B
KO
K08517
vesicle transport protein SEC22
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04130
SNARE interactions in vesicular transport
clum04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117729308 (sec22bb)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117729308 (sec22bb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117729308 (sec22bb)
Membrane trafficking [BR:
clum04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
117729308 (sec22bb)
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
117729308
NCBI-ProteinID:
XP_034386164
Ensembl:
ENSCLMG00005016690
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All DBs
Position
4:21716377..21721429
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AA seq
215 aa
AA seq
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MVLLTMIARLADGLPLAASMQEDEQLGRDLQQYQSQAKQLFRKLNDQSPTRCTLEAGSMA
FHYFIEKGVCYLVLCEASFAKKLAFAYLEDLQAEFHEQHGKRVPTVSRPYSFIEFDTYIQ
KTKKSYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKASNLSSLSKKY
RSDAKYLNTRSTYAKLAAGGVFFIMLIVYVRFWWL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgctgacgatgatcgcgcggctggcggacggcctgccgttagccgcctcaatg
caggaggacgagcagttgggtcgggacctccagcagtatcagagtcaagcgaagcagctc
ttcaggaaacttaatgatcagagtcccacacgctgcactttagaggctggctccatggca
tttcactatttcatagagaagggcgtgtgctacctggtgctgtgtgaagccagctttgcc
aagaagctggccttcgcttacctcgaagacctgcaggcagagtttcatgagcagcacgga
aagagggtgcccactgtttcccggccctactccttcatcgagtttgacacctacatccaa
aaaaccaagaagtcgtacattgacagccgagcgaggaggaatctgggcagcatcaacacg
gagctgcaggacgtccagaggatcatggtggcgaacatagaggaggtgctgcagagagga
gaggctctctctgcgctggactccaaggccagcaacttgtccagcctgtcgaagaagtac
cggagcgacgccaagtacctgaacacccgctccacctatgccaagctggcggccggtggt
gtgtttttcatcatgctcattgtctatgtacgcttctggtggctctga
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integrated database retrieval system
