Cyclopterus lumpus (lumpfish): 117729425
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Entry
117729425 CDS
T09199
Symbol
cacna1ab
Name
(RefSeq) LOW QUALITY PROTEIN: calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04010
MAPK signaling pathway
clum04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117729425 (cacna1ab)
04020 Calcium signaling pathway
117729425 (cacna1ab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117729425 (cacna1ab)
Ion channels [BR:
clum04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117729425 (cacna1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
117729425
NCBI-ProteinID:
XP_034386338
Ensembl:
ENSCLMG00005010386
LinkDB
All DBs
Position
1:24856497..25004298
Genome browser
AA seq
2587 aa
AA seq
DB search
MLTPLYSDHGGSVRWPQSSSCTTSSQGLHRTLRCHPPPISGSSVGPNPTYYHAVYDVRVE
QYGDVPFTGGGGGYGVRPGRGSLSLVTSITDPTVPLVRRRGGVVDHRDVIMAHQAHKLHN
TPQARRKQWEMARFGDEVPNRYGGGGGGGGGGGGGGGGGGGGAGGQGGPGGRGGSRQGGP
PAGQRVYKQSMAQRARTMALYNPIPVRQSCLTVNRSLFLFSEDNLVRKYAKKITEWPPFE
WMILTTIIANCIVLALEQHLPDGDKTPLSERLEETEPYFIAIFCFESGIKILALGFALHK
GSYLRNGWNVMDFVVVLTGILSSVGSQLDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMK
AMIPLLQIGLLLFVAILMFAIIGLEFYMGKFHTTCYDKVTREVVGTLPCGTELPSRLCPN
GTLCEGRWLGPNYGITQFDNILFAVLTVFQCITMEGWTEMLYFSNDVEGSAWNWMYYIPL
IIIGSFFMLNLVLGVLSGEFAKERERVENRSEFLKLRRQQQIERELNGYLEWICKAEEVI
LAEEDGPVNFDGSRRRPTIKTKNNKTELLNPEEGEDNMGDAVGFARSSLKNGKDGSNYSK
KERRLRFFIRKMVKTQAFYWTVLCLVGLNTMCVAAVHYNQPELLSDFLFYAEFIFLGLFM
SEMCIKMYGLGIQPYLHSSFNCFDCVVIVGSIFEVVWATIKPGTSFGISVLRALRLLRIF
KVTKYWAPLRNLVVSLLNSMKSIVSLLFLLFLFIVVFALLGMQLFGGQFNFENGTPSTNF
DTFAAAIMTVFQVLTGEDWNMVMYDGIESQGGVNNKGMVFSIFFIVLTLFGNYTLLNVFL
AIAVDNLANAQELTKDEEEQEEAANQKTAMQKAKEVAEVSPLSAANLSIAAXVHTHTHTH
KAIHKHTITIITXKEQQKNNIKGSKSVWEQRTSEIRRQNLMTSREALYNELEQEDWKVGG
EGEEVSYPRKARGDMTHLDRPLVVNPQDNRNNNTNKTPPGELPLDQEYRRQDVDHRRKAA
HHSHSHSHSHHHRKANGPDGGETGQPAAETRMERGFSCTSLGNVEGQQGEERHGHRSHRG
HRHRSNREGREARSMSPHRGGDRRSRQHRKEGEEGRRHRSKGTEAEGEKGEEEEGGGGGG
GGGGGEGRKARRHRHGNQERSRGHRARREHHSTGPSLSTARPVQQHNEDLDNLRNNSKLA
AGAHEHPYAFPPDHPDHVNNLLNCRDADTHTLIHSMDSLILTSMAKPEYTQIDMPPVYPY
PSTNAILQVNKNANTDQKKNEEKKEEDDEGGDEDGPKPMPPFSSCFIMSVTNPFRRCCHY
ILTLKYFEFSILSVIAMSSIALAAEDPVSPDSPRNNVLRYFDYVFTGVFTFEMLIKMVVL
GLFLHQGSYFRDLWNILDFIVVSGALVAFAFTRSTLKGSSKGKDISTIKSLRVLRVLRPL
KTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLFKGRFFYCTDESKEFE
RDCRGEYLVYDGRDEVKAQKREWKKYDFHYDNVAWALLTLFTVSTGEGWPQVLKHSVDST
YENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEDYSLEKNERA
CIDFAINARPLTRHMPKNKLSFQYRMWQFVVSPPFEYSIMALIALNTIVLMMKFDGASET
YDNVLKNFNIVFTTFFFMESVLKVIAFGPLNFFRDAWNIFDFVSVLGAVTDILVTELGNN
FINLSFLRLFRAARLIKLLRQGETIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQL
FGNLALGEEGESAINEHNNFRTFIMALMLLFRSATGEAWHDIMLACLGGKECDRDSGNTE
PECGSTFAYTYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRIWAEY
DPAACGRIHYKDMYSLLRVISPPLGLGKKCPHRVACKRLLRMDLPVADDNTVHFNSTLMA
LIRTALDIKIAKGGADKHQMDAELRKEMMAIWPNLSQKTLDLLVTPHKAATDLTVGKIYA
AMMIMEYYRQSKTKKLQALREEQRMEPPSEVGGTEGQGGQGLNGLPSTQTDNLNSIPPEG
GMTESQSWVTAKAQEMFQKTGNWSPDRPYPDDLHDNRHNSQTVEMREMGRDGYSDTEPYH
PMDGHGRTLSMPRLSADNQRAHAVSRRRHKPRGNNLSTITDTSPMRRSTSSLVHGRTGRG
VRLDDYSLERMVSEEGRHGGGRRHRDRSHRASQRSLARYTDADTGLGTDLSTTTQSGELP
PKERERDRGRTKDRRHHHHHHHHHHGSMDKERYGPDRHEYPHRPPHDRQWSRSPSEGPDG
RGHRQGSSSVSGSPVPSTSGTSTPRRGRRQLPQTPAVPRPHVTYSPAVRKPSYGPPGPGR
LRSPSPRHFSPPDHDRGYHQRPPSRQASPHPGGSSSLHGSPRSPRHQSPRSPLHGSPRSP
HRGRWSGPPPGDSLEGDGPFYERDYEYERHHEPPAYEQSLSHGNPHPHGGNPHPHPRSPR
TARQGPPPPPHPHPRRVPNGYRSTSPSPNRRGPPGAPPHPHHRPPHARGPRKGLHEPFSE
TDEDDWC
NT seq
7764 nt
NT seq
+upstream
nt +downstream
nt
atgctgacccccctctactcggaccatggcggctcggtgcggtggccccagagttcctcc
tgcaccacctcctctcagggtctccaccggacgctccgctgccaccctcccccgatcagc
gggagcagcgtgggccccaaccccacctactatcacgccgtctacgacgtccgggtggag
cagtacggagacgtgccctttaccggcggcggcggcggctatggggttcgccctggccgg
ggctccttgtcccttgtcaccagcatcacagaccccacagtcccgttggtccgccggagg
ggaggagtggtggaccaccgcgacgtcatcatggcccaccaggctcacaagctgcacaac
acaccacaggccagaaggaaacagtgggaaatggcgcgttttggagacgaggtacccaac
aggtatggaggaggaggaggaggaggaggaggaggaggaggtggtggtggcgggggtggc
gggggtgccggcggacaaggggggcccggcggccgcggcggcagcaggcaaggggggccc
cccgcagggcagcgggtgtacaagcagtcgatggcccagagagcccggaccatggccctg
tacaaccccatacccgtccggcagagctgcctaacggtcaaccgctccctcttcctcttc
agcgaagacaacctggtgaggaagtacgccaaaaagatcacggaatggcctccttttgag
tggatgattctcaccactatcattgcaaactgcatcgttctggctctggagcagcacctt
cctgacggagacaagacgcctctttccgaacgcctggaggaaacggagccctacttcatc
gccattttctgcttcgagtccgggatcaagatcctggctctgggcttcgcgttgcacaag
ggctcctacctcaggaacggatggaacgtcatggacttcgtggtggtgctcacaggtatt
ctgtcgtcagtcggctctcagctcgacctgaggactctccgagccgtcagagtgttacga
ccattgaagctggtgtctgggattcccagcctgcaggtggtgctaaagtccattatgaag
gccatgatccccctgctgcagatcggcctgctgctgtttgtggccatcctcatgttcgcc
atcatcggcctggagttctacatggggaagttccacacgacctgctatgacaaagtcacg
cgagaggtggtgggcacgttgccgtgcggcacagagttgccgtcgcggttatgccccaac
ggcacgctgtgcgaaggtcgctggctcggacccaactacggcatcacacagttcgacaac
atcctgttcgccgtgctcaccgtcttccagtgcatcaccatggagggatggacggaaatg
ctctacttcagcaacgacgtggagggcagcgcctggaactggatgtactacatccccctc
atcatcatcggctccttcttcatgctcaacctggtgctgggcgtgctctccggtgagttt
gccaaagagagagagcgagtggagaaccggagcgagttcctgaagctgaggcggcagcag
cagatcgagagggagctcaacggatacctggagtggatctgcaaagcagaagaagtgatt
ttggcagaggaggacggcccggtgaactttgatggttcgaggcgaaggccgaccatcaaa
accaaaaacaacaagacggagctgctgaaccccgaagaaggagaggacaacatgggggat
gcagtaggtttcgcccgctccagcctgaagaacgggaaagacggctccaactacagcaag
aaggagcgccggctgcgattcttcatccgcaagatggtgaagacgcaggctttctattgg
acggtgctgtgcctggtgggcctcaacaccatgtgcgtggccgcggtgcactacaaccag
ccggagctgctctccgacttcctcttctatgcagagtttatcttcctgggcctcttcatg
tctgagatgtgtatcaagatgtacggtctgggcatccagccctacctgcactcctccttc
aactgcttcgactgtgtggtcattgtgggcagcatcttcgaggtggtgtgggccaccatc
aaaccaggaacctcctttgggatcagtgtgttacgagctctgagactgctgcgcatcttc
aaagtcaccaagtactgggctcctcttagaaacctggtggtgtctctgctgaactctatg
aagtccatcgtcagcttgctgttcctcctcttcctcttcatcgtggtctttgccctgttg
gggatgcagctgttcggaggacagttcaacttcgaaaatggaacgccttccaccaacttt
gacacgttcgcagcagcgatcatgacggtgtttcaggtcctgactggagaggactggaac
atggtgatgtacgacggcatcgagtctcagggaggagtgaacaacaaagggatggtcttc
tccatcttcttcatcgtcctcacgctcttcggcaactacactctgcttaacgtcttcttg
gccatcgccgtcgacaacctggccaacgcccaggagctcaccaaggacgaggaggaacag
gaggaggcagccaatcagaagacggcgatgcagaaggccaaggaggtggcggaggtcagc
ccgctgtcagcagccaacctgtcgattgcagcgtgagtgcacacacacacacatacacac
aaagcaatacataaacacactatcacaataataacataaaaagagcagcagaagaacaac
atcaagggcagcaagtcggtgtgggagcagagaaccagcgagatccgccggcagaacctg
atgacgagccgcgaggcgctctacaacgagctggagcaggaggactggaaggtggggggc
gaaggcgaggaggtgtcctacccacggaaggcgcgtggtgatatgacccacctggaccgg
ccgctggtggtcaacccgcaggacaaccgcaacaacaacaccaacaagacgccgcccggc
gagctgcccctggaccaggagtaccggcgccaggacgtagaccaccgccgcaaagccgcc
caccactcccactcccactcccactcccaccaccatcggaaagccaacgggccggacggc
ggggagacgggccagcccgccgcggagacccgcatggagcggggcttcagctgcacgtcc
ctgggcaacgtggagggccagcagggggaggagaggcacggccaccggagccaccggggc
caccggcaccggagcaacagggagggcagggaggcccgcagcatgtccccccaccgcggc
ggcgaccggaggtcccggcagcaccgcaaggagggcgaggaaggcaggcggcacagatcc
aaggggacggaggcggagggcgagaaaggcgaggaggaggaaggaggaggaggaggagga
ggaggaggaggaggggagggccggaaggcgaggcggcatcgccacggcaaccaggagagg
agcagagggcatcgcgccagaagggagcaccacagcaccgggcccagcctctccaccgcg
cggcccgtccagcagcacaacgaggacctggacaacctccgcaacaacagcaagctggcc
gccggcgcccacgaacacccgtacgccttcccgccggaccaccccgaccacgtcaacaac
ctgctgaactgccgcgacgccgatacccacaccctgatccacagcatggacagcctgatc
ctgactagcatggccaagcccgagtacacgcagatagacatgccgcccgtctacccgtac
ccctccaccaacgccatcctgcaagtgaacaagaacgccaacaccgaccagaagaagaac
gaggagaagaaggaggaggacgacgagggaggcgacgaggacggccctaagcccatgccc
cccttcagctcctgcttcatcatgtccgtcaccaacccgttccggaggtgctgtcactac
atcctgactctgaagtatttcgagttcagcatcctgtccgtcatcgccatgagcagcatc
gccctcgccgccgaggaccccgtctcgcccgactcgccgcgaaacaacgtgctgcgttat
tttgactacgttttcacaggcgtcttcacatttgaaatgttgatcaagatggtggtgctg
ggcctgtttctccaccagggctcctacttccgcgacttgtggaacattctggactttata
gtggttagtggtgctctggtggccttcgccttcacgaggtcaacgctgaagggcagcagc
aagggcaaagacatcagcaccatcaagtccctccgggtgttgagggtgctgcgtcctcta
aagaccatcaaacgactccccaagttgaaggcggtgttcgactgcgtggtcaactctctg
aagaacgtgctgaacatcttgatcgtctacatgctcttcatgttcatcttcgccgtggtg
gccgtgcagctcttcaaagggcgtttcttctactgcaccgacgagtccaaagagtttgag
agggactgcaggggcgagtacttggtgtatgatggcagagatgaggttaaagctcagaag
cgggagtggaagaagtacgattttcactacgacaacgtggcttgggccctgctcaccctc
ttcactgtgtccactggagaggggtggccgcaggtgttaaagcactcagtggactccacc
tatgagaatcagggccctagcccgggttataggatggagatgtccatcttttacgtggtg
tacttcgttgtcttccccttcttcttcgtaaacatcttcgtggctctcatcatcatcacc
ttccaggaacagggggataagatgatggaggactacagtttagaaaagaacgagagagcc
tgtatagacttcgccatcaacgcccggcctctgactcgccacatgcccaagaacaaactg
agtttccagtaccgcatgtggcagttcgtggtgtctccgcccttcgagtacagcatcatg
gctctgattgcgctcaacaccatcgtcctcatgatgaagttcgacggcgcgtcggagacg
tacgacaacgtcctgaagaacttcaacatcgtgttcaccaccttcttcttcatggaatcg
gtcctcaaggtcatcgctttcggccctctgaatttcttcagagacgcctggaacattttt
gactttgtgtccgtcctcggagccgtcaccgacatattggtgacagaactcgggaacaac
ttcatcaacttgagcttcctgcgtctcttccgagcggctcgcctcatcaagctgctgcgt
cagggggagacgatccgcatcctgctgtggaccttcgtccagtccttcaaggctctgccg
tacgtgtgcctcctcatcgccatgctcttcttcatctatgccatcatcggcatgcagttg
ttcgggaacttggccttgggcgaagagggagagagcgccatcaacgagcacaataacttc
agaaccttcatcatggccctcatgctgctgttcaggagcgccacgggcgaggcgtggcac
gacatcatgctggcgtgcctgggtgggaaggagtgtgacagggactcggggaacactgag
cccgaatgtggcagcaccttcgcctacacctacttcgtctccttcatcttcctctgctcc
ttcctgatgctgaacctgttcgtggccgtcatcatggacaacttcgagtacctgacccgg
gactcgtccatcctggggccgcaccacctggacgagtatgtaaggatatgggccgagtac
gacccggccgcctgcgggcgcatacattataaggatatgtacagtttattgagagttatc
tcccctcccctgggccttggcaagaagtgcccccatagggtggcctgcaagaggctgctg
cgcatggatctgccggttgccgacgacaacacggtacattttaactccaccctgatggct
ctgatcaggacggcgctggacataaagatcgccaagggcggtgcagacaagcaccagatg
gatgccgagctgaggaaggagatgatggccatttggcccaacttgtctcagaagaccctg
gacttgctggtcacgccgcacaaggcagccacagacttgacggtgggcaaaatctacgcc
gccatgatgatcatggaatactaccggcagagcaagacgaaaaagctgcaggccctgcga
gaggaacagcgcatggagccgccctccgaggtagggggcaccgaaggccagggggggcag
ggcctcaacggcctccccagcacccagacggacaacctcaatagcatacctcccgagggt
ggcatgactgagagccagtcgtgggtgacggccaaagcccaggaaatgttccagaagacg
ggtaactggagccccgacaggccgtaccccgacgatctccacgacaaccgtcacaactcg
cagacagttgagatgagggagatggggcgggacgggtactccgacactgagccctatcac
ccaatggatgggcatgggcggaccctctccatgccccgcctctcggcagacaaccaaaga
gctcatgctgtttcgcggaggagacacaagcctcgtggaaataacctcagtaccatcacc
gacaccagtccgatgcgtcgctccacctccagcctggtccacgggcgcacgggccgcggc
gtgaggctggacgactactccctggagaggatggtgtccgaggaggggaggcacggggga
ggacggcggcaccgggacaggagtcaccgggcgtcgcagcgctccctcgccagatacacc
gacgccgacacgggtctgggcacagatctcagcaccaccacgcagtcgggcgaactccca
cccaaggaacgcgagcgggaccgcggccggaccaaggaccgccgccaccaccaccaccac
caccaccaccaccacggctccatggacaaggagcgctacgggcccgacagacacgagtac
ccccacaggcctccccacgaccgccagtggtcccgctcgcccagcgaggggcccgacgga
cggggacacagacagggcagtagttcggtgagcggcagcccggtcccctccacctcgggg
accagcactccgcggagaggccgtcgccagctgccccagacccccgcggtcccccgtcca
catgtcacctactcgcccgccgtccgcaagcccagctacggccccccggggccgggccgg
ctgcgctcgccctccccccgacacttctccccgccagaccacgacagaggctaccaccaa
cggccgccgtcgcgccaggcctctccccaccccgggggctcctcgtccctgcacggctcg
ccgcgctccccccggcaccagtccccgcgctcgcccctccacggctcccccaggtccccc
caccggggccgctggagcgggcccccgcccggggacagcctggagggggacggacccttc
tacgagcgcgactacgagtacgagcggcaccacgagccccccgcctacgagcaaagcctc
tcccacggcaacccgcacccgcatggggggaaccctcacccgcacccacgctcacccagg
actgcccgccaagggccccctccgccccctcacccgcatccacgcagggtgcccaatggc
taccgctcgacctccccttccccgaatcggcgggggccgcccggagcgcccccacaccca
caccaccggcccccccacgcccgagggccccgcaaaggcctgcatgaaccttttagtgag
acggacgaggacgactggtgctag
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integrated database retrieval system
