Cyclopterus lumpus (lumpfish): 117729455
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Entry
117729455 CDS
T09199
Symbol
trappc8
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117729455 (trappc8)
Membrane trafficking [BR:
clum04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
117729455 (trappc8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
Motif
Other DBs
NCBI-GeneID:
117729455
NCBI-ProteinID:
XP_034386392
Ensembl:
ENSCLMG00005020031
LinkDB
All DBs
Position
4:3335581..3356257
Genome browser
AA seq
1487 aa
AA seq
DB search
MAQCVQSVQEFVQDSFVPMVAVLCSEEAERVTRKNNLNFAELLRPFCRLTSEGHIRDPNN
QVQVVKNLRICVNNVVTSPNTAFSPAQRRVLNEVVLSCQPQEGTATNVITAGDCDLNFSD
HSLKASAPWYSAWKETLSEVSASKHYTATTPWFEAYRENFLQSMPASEHEFLNHYLACLL
VVSSTETVPVEQFLKLSQEQHRIQHSGDYTNPKWFIPNTLKYYVLLHDMSEGGEQRADSV
YEDMKQRYGHQGCYLLKMNSRTFSAEEDEQIPDPWSQYLHRNNLQSQEVLDDAAVNSAAV
ENNISAAEGDSHPSTEKGEASNSLESHPLQLDTASSSGSLHTLSAVNPELKKGARDPESL
AGGAGSHGASLTLNDHDHIRQFIQEFTFRGLLPHIEKNIRQLNDQLVSRKGLSRSLFTAT
KKWFGGGKVPEKGISEPKSTCGLLYPPEAPELQIRKMADLCFLVQHYELAYSCYHTAKKD
FLSDQAMLYAAGALEMAAVSAFLQAGAPRPYPAHYMDTAIQTYRDVCKNMVLAERCALLS
AEILKSQVKYSDAATLLIKMTSEDSDLRSALLLEQAAHCFINMRNPMVRKFAFHMILAGH
RFSKAGQRRHALRCYCQAMQVYKERGWSLAEDHINFTIGRQSFTLSHPENAVTAFRQILT
NDSRQTATQQGAFLREYLYVYKSVVLGNEDRLPQLPLPCIHSSATRVYFGHERRLAEGEK
QAATHVSLDQEYDQDLAAMWCHLEEQLVAAANRGIVPATFQPTQCCLNSQTDNLRFPLAV
AEEPIIVEVTFRNPLKVPLALSNLSLLWRFTAEGATPSEEKTTEESAGEAVTNEEALTEG
TTPKDDVVTTEIILEFLMGPEETKLARLRLLPHSTGQLNIVGVVYNLAAASSGEPTPSSE
GQQALEVMVVRGRQDLKIQGPRLNQTKEDKMLVRHGQDRRLDPIITPPMPLMEVFFLQFP
TALLCGEIRKAYVEFCNVSGGALCGLRVASTHPDFFTFGSQTTTPLTPVSPTSAENCSAY
KTTATTRQPGSVASETLVSAKDFSQLSGVMEIPIEGGTLQPGESTQLPLWLRGPDQEGVH
EINFLFYYESTTKGIKISHRVLRHTVFICASRSLSVQASACRSSVPPHHSVDEKGSGGTL
VFVDVENINTSEAGVREFHIIQVSSSSRHWCLHKCINPANDKDCKLTSRERAKLCFRATR
CKPHQATSAAVEKYTFADLNLGNERIISSSTPCGDFFFRGCRPPQPQRVDGTSSRTSSTN
KSPASDISNIVRKCNELDLNIIVIWKAYVVEDNKQLILEGQLHVALQTIGKEASSLTPKE
EAQEMALLKFKAEVPAPVALLSAELSQLIKTNLHYPETYTHPFVQESLCVVPVTLTLSNC
SSAPVDVLIDLRHKSSSPESLEVHSSFTWVGQTQYKLQLKPLEVLCLTLRACFLQAGVYN
LNTPRVFAKLAEQGAMCETSQQAASPALIIINSARVQPQGDVLGLLD
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaatgcgtacagtccgtgcaggagttcgtccaggactcgttcgtcccgatggtg
gccgtcttatgtagcgaagaggcggagagagtgactcgcaagaacaacctgaatttcgct
gagctgctgcggcctttctgcagactgacgtccgaaggtcacatccgggaccccaacaac
caggtgcaggttgtgaaaaacctgcgcatctgtgtcaacaatgttgtgacaagcccaaac
acggccttcagccccgcccagcggcgagtgctcaatgaagtggtgttatcctgccagcca
caagagggcactgccaccaacgtgatcacggcaggagactgcgacctcaacttcagtgat
cactctcttaaagctagcgccccctggtacagtgcctggaaagaaacactgtctgaagtc
agcgcctccaagcactacacagcgaccacgccctggtttgaagcctacagggagaacttc
ctgcagtcaatgcccgcctccgaacacgagttcctcaaccactacctcgcctgcctgctg
gtggtgtcctccaccgagactgtccctgtggagcagttcctcaagctctcccaggagcag
cacaggatccagcatagcggagattacaccaaccccaagtggttcatccccaacacgctc
aagtactacgtcttactgcacgacatgagcgaggggggcgaacagagggcagattcagtg
tacgaggatatgaagcagaggtacggtcaccagggctgctacctgttgaaaatgaactct
cgtaccttctcggctgaagaggacgaacagattccagacccctggagtcagtacctgcac
aggaataacctgcagagccaggaggtgcttgatgatgcagctgtgaacagtgctgctgtg
gagaacaacatcagtgcagctgaaggggacagccatccctctacagagaaaggcgaagcc
tccaacagcctggaaagccaccctctccagctggacacagcgagcagctcggggagcctg
cacaccctcagtgctgtcaaccctgagctgaagaaaggggcgagggatccggagagcctg
gcggggggagcagggagccatggggcatctctgaccctgaatgaccacgaccacatcaga
cagttcatccaagagttcaccttcagaggtctgctgccacacatagagaagaacatccgg
cagctcaacgaccagctggtctccaggaaaggtctgagccggtctctgttcaccgccacc
aagaagtggtttggtggagggaaagttccggagaagggcatcagtgaaccaaagagcaca
tgtggccttctatatcccccagaagcccctgagctgcagatcaggaagatggccgacctg
tgcttcctggtccagcactacgagctggcctacagctgctaccacacggccaagaaagac
ttcctgtcagaccaggccatgctgtatgctgcaggggcactggaaatggctgcagtgtcg
gcctttctgcaggctggagctcccagaccttacccggcccactacatggacaccgccata
cagacgtacagagacgtctgcaagaacatggtgctggctgagcgctgtgcgttactcagt
gctgagatcctcaagagtcaggttaaatactctgacgctgcaactctcctcatcaagatg
accagcgaggactctgacctgcgcagtgctctgctgctggagcaggccgcccactgcttt
attaatatgcgcaatcccatggtgcgcaagtttgccttccatatgatcctggccggtcat
cgtttcagcaaagcaggacagaggaggcacgcgctgcgctgctactgccaagccatgcag
gtctacaaggagcggggctggtctttggcggaggatcacatcaacttcaccatcggtcgt
cagtccttcacactcagccatccagagaatgccgtgacggccttcagacagatcctgacc
aatgacagcaggcagacggccacacagcagggcgccttcctcagagaatacctctatgtg
tataagagtgtggtattgggaaatgaagaccgcctcccccagctgcctctgccctgcatc
cacagctcggccacacgggtctacttcggacacgaacggcgcctcgcagaaggtgaaaag
caggcagccacccacgtgtctctggaccaggagtacgaccaggacctggcagccatgtgg
tgccacctggaggaacagcttgtggctgcagccaacagggggattgtcccagcaaccttc
cagcccacccagtgctgcttgaacagccagacagacaacctgcgcttcccactggctgtg
gccgaggagccaatcatagtggaggtgacgttcaggaaccctctgaaggttcctctggct
ctgtccaacctctcactcctctggaggttcactgccgagggtgcaactccatccgaggag
aagacgactgaagagtcagcaggagaggccgtcaccaacgaggaggccctcactgaaggg
acgacaccgaaagacgacgtcgtaaccacagagatcatcctggagtttcttatgggtcca
gaggagaccaagctggctcgactccggctgctgccccacagcactggccagctgaacatt
gtgggtgtggtttacaacctggctgcagcctcctctggagagccgactcccagctctgaa
ggccagcaggcgttggaggtcatggtggttcggggaagacaggacctgaagatccagggc
ccacggctgaaccagaccaaagaggacaagatgttggttcgacatggtcaggaccggcgc
ctggatcccatcataactccaccaatgcccctaatggaggtcttcttcctgcagttcccc
actgctctgctgtgtggtgagatcaggaaggcctacgttgagttctgcaacgtcagcggc
ggcgctctgtgcggccttcgggtggcgtccacacacccggatttcttcacgtttggcagc
cagaccacgacccccctcacgcccgtcagcccgacctcagccgagaactgctcggcctat
aaaaccacggctactacccgccagccgggctcagtggcgtctgagacgctggtctcggcg
aaggatttcagccaactgtccggtgtgatggagatcccgatagaaggcggcacactgcaa
ccgggggagtccacccagctgcctctctggctcagaggaccagaccaggagggagtccat
gagatcaacttcctgttctactacgagagcacaacgaaaggaatcaaaatcagtcatcgg
gtgttgcgtcacacagtgttcatctgtgccagtcgctctctgagcgtgcaggcgtcggcg
tgccgcagcagcgtccccccccatcacagcgtggacgagaagggcagcggcggaacgctg
gtcttcgtcgatgtggagaacatcaatacgagtgaagctggcgtgcgtgagttccacatc
atccaggtgtccagcagcagtcgacactggtgcctccacaagtgtatcaacccggccaat
gacaaagactgtaaactcaccagcagagaaagagccaagctgtgtttcagagccacgcga
tgcaagccccaccaagcgacctcggctgccgtagagaaatacacctttgcagacctgaat
ctgggaaatgaacggatcatcagctcctccactccctgtggagatttcttcttccgtggc
tgtcggcccccgcagcctcagcgagtggacgggacgtcgtccaggacttcctccaccaat
aagagtccggcctctgacatcagcaacatcgtcaggaagtgcaatgagctggacctcaac
atcatcgtcatctggaaggcctatgtggtggaggacaacaaacagctgatcctagagggc
cagctccatgtggcgctgcagaccatcggcaaagaggccagttctctgactcccaaagag
gaagctcaggagatggcgctgctcaagtttaaagcggaggttcctgctccagtggccctg
ctctctgcagagctgtcccagctcatcaagaccaacctgcactaccccgagacctacaca
cacccgtttgtccaggagagtctctgtgtggtgccagtcacgctgactctgtccaactgc
tcctcggctccagtggacgtcctcatcgacttaagacacaagagcagcagcccagagtct
ctggaggtccacagctcgttcacctgggtgggtcagacccagtacaagctgcagttgaag
cctctggaggtgctgtgtctgaccctgagagcctgtttcctccaggcaggagtctacaac
ctcaacacgccacgagtgttcgccaagctggccgagcagggcgccatgtgcgagacgagt
cagcaggcggcgagtcccgccctcatcatcatcaacagtgcccgggtgcagcctcagggg
gacgtacttggtcttcttgattga
DBGET
integrated database retrieval system
