Cyclopterus lumpus (lumpfish): 117730254
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Entry
117730254 CDS
T09199
Symbol
itcha
Name
(RefSeq) itchy E3 ubiquitin protein ligase a
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04120
Ubiquitin mediated proteolysis
clum04144
Endocytosis
clum04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117730254 (itcha)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117730254 (itcha)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117730254 (itcha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117730254 (itcha)
04121 Ubiquitin system [BR:
clum04121
]
117730254 (itcha)
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117730254 (itcha)
Membrane trafficking [BR:
clum04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117730254 (itcha)
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
HECT type E3
117730254 (itcha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
117730254
NCBI-ProteinID:
XP_034387695
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All DBs
Position
5:complement(20287634..20304269)
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AA seq
812 aa
AA seq
DB search
MKAQLQVTVLSAKLKENKKNWFGPSPYVEVAVDGQSKRTEKCNNTHSPKWKQPVTVIVTP
VSKLIFRVWSHQTLKADILLGMAMLEIRETLKANDLKICEVVQTLQLCSDRDHRDVVGDL
SVCLDGMQLDPETFASAEREHATAPNGIARKNGDTDNRSSRDTSPSSDSEEWVIVPNGHA
VNGTGSPSQSPGGSNASRPPRPARPPPPTPQRPTASPTSLSSSSPSELSEGPASDGSSQV
SASGCSNQQDDSGAAIVPAATTTTTTTTIETTTTTAAAAATISTTTTEAAAAPPPPPPPS
SSSSAATAATATAGSSQTASGPKPGTSASAALATTTPRIPPMSNGPLPPGWEQRADQNGR
VYYVDHIEKRTTWERPDPLPSGWERRVDPMGRVYYVDHITRTTTWQRPTQESVRNYEEWQ
HQRSQLQGAMQQFNQRFIYGLQDQLAATANKEFDPLGPLPHGWEKRTDTNGRVYFVHHPT
RATQWEDPRTQGLLNDKPLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRTGKSSLENGPQ
ITYVRDFKAKVQYFRFWCQQLSMPQHIKINVSRKTLFEDSFQQIMSFHPQDLRRRLWIIF
PGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPDHLKYFKFI
GRFIAMALFHGKFIDTGFSLPFYKRILNKPLALKDLESIDPEFYNSLIWIKDNNIEECGL
EMFFSVDKEILGEVTTHELKSDGGNLQVTEENKEEYIRLVAEWRLSRGVEEQTQAFFEGF
NEVLPQQYLQYFDAKELEVMLCGMQEIDLVDW
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcccaattacaagtcacagtgctttcagccaagctgaaggaaaacaaaaagaac
tggtttggtcccagcccttatgttgaggtagccgtggatggccagtcaaagaggactgag
aagtgcaacaacactcacagtcccaaatggaaacagcctgtcacagtaattgttactccg
gtcagcaagctgatatttcgtgtttggagccaccagacactgaaagcagacatcctgttg
ggaatggccatgctggagatcagagagaccctcaaagctaacgacctgaaaatttgtgag
gtagtgcagacgctgcagctgtgctctgacagagaccatcgggatgttgtaggtgacctg
tcggtctgtcttgacggcatgcagttagacccagaaacttttgcctcggcagagagagaa
catgctactgctccaaatggaattgcaagaaaaaatggagacactgacaacaggtcaagc
agagacacatctccctccagtgactcagaggagtgggttattgtacctaatggtcatgcc
gtcaatggtacgggttccccttcccaatctccagggggctccaacgcctcgcgtccgccc
agaccagcacgacctccgcctccgacgcctcaaagaccaacagcctccccgacctcttta
agcagttcctcccctagtgagctgagtgaaggtccagcatctgatggctcctctcaggtt
tcagctagtggatgttcaaatcagcaggatgactcaggagcggcaatagtaccagcagca
acaacaacaacaacaacaacaacaatagaaacaacaacaacaacagcagcagcagcagca
acaatatcaacaacaacaacagaagcagcagcagcaccaccaccaccaccaccaccatca
tcatcatcttcagcagcaacagcagcaaccgcaacagcaggttcttcccagacagcaagt
ggcccaaaaccagggacctctgcctcagcagctctggccacaacaactcccagaatccca
cccatgagcaacggccccttaccaccaggctgggagcaaagggcggaccagaacggacgg
gtgtactatgtggatcacattgagaaaaggacaacctgggaaaggcccgaccccctgcca
tcagggtgggagcgcagggtggacccgatgggtagggtgtactacgtcgaccacataacc
cgaactacgacttggcaacgacccactcaggagtcggtgcgtaactatgaagagtggcag
caccagcgcagccagctgcagggagccatgcagcagtttaaccagcggttcatttatggg
ctccaagaccagttggcagccacggccaacaaagagtttgacccactgggaccactgcca
catggttgggagaagagaacagacaccaacggcagagtgtattttgtccatcacccgact
cgggcgacacagtgggaggaccccaggacacaagggctgctgaatgacaagcccctgcca
gagggttgggaaatgaggttcacagtagatggtattccctactttgtagaccacaacagg
cgaaccaccacttacattgaccctcgcacagggaaatcctcacttgagaatgggccacag
ataacctatgtcagggacttcaaagccaaggtgcaatacttcaggttctggtgtcagcaa
ttgtcgatgcctcagcacattaagatcaacgtctccaggaaaaccttgtttgaggattca
tttcaacagatcatgagcttccatcctcaagatctgaggcggagactgtggatcattttt
cctggagaggaaggcttggactacggaggtgtggccagggagtggttcttcttgctctct
catgaggtcctgaaccccatgtactgtttgtttgagtatgctggcaaggacaactactgt
ctgcagatcaaccctgcgtcctacatcaaccccgatcacctcaagtacttcaagttcata
ggacgcttcatcgccatggccttgttccatggaaaattcatcgacacgggtttctccctg
cccttctacaagcgaattctgaacaaacctctggctctcaaggacctggagtccatcgat
ccagagttttacaactcactcatctggatcaaggataataacatagaggagtgcggactg
gagatgttcttttccgttgacaaagagatcctgggggaggtcaccacccacgagctgaaa
tcggatggaggaaacctccaagtaactgaggaaaataaggaggaatacatcaggttggtg
gcagagtggaggctgtccagaggtgtggaggagcagactcaagcattctttgagggcttc
aatgaagtcttgccccagcaataccttcaatactttgatgctaaggaattagaggtgatg
ctctgtgggatgcaggagatagacctggtggactggtag
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