Cyclopterus lumpus (lumpfish): 117730711
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Entry
117730711 CDS
T09199
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117730711
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117730711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_6
UvrD-helicase
Prok-RING_4
Gp58
Motif
Other DBs
NCBI-GeneID:
117730711
NCBI-ProteinID:
XP_034388532
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All DBs
Position
5:complement(1432926..1435233)
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AA seq
581 aa
AA seq
DB search
MLFRPEVRVSSEEVKLRHSLLPRGEMEPKGDQLDRETFSCSICLDLLKDPVTIPCGHSYC
MNCIKDHWDEEDGKKLLSCPQCRQTFTPRPVLLKNTMLAVVVEQLKKTGLQAAPADHCYA
GPEDVACDVCTGRRLKAFKSCLVCLVSYCEKHLQPHCDVPQLKKHQLVDPSNQLQENICS
RHDEVMKMFCRTDQQCICYLCSLDEHKGHDTVSAAAERTERQRELEGSRLNIQQRIQDRE
KDLKLLHQEVEAINLSADKTVKDSEKIFTELIRLMKKRSSDVKQQVRSQQRTEVSRVKEL
QEKLEQEITELKRNDAELQKLSHTEDLHQLLHHYPSLSPLSGSTDSSSINIRPLRYFEDV
TAAVSGLRDELQDVLRDKWTNVSLTGTEVDVLLSAPEPTTRDGFLRCSRELTLDPNTANT
QLLLSDGNRKATFMNEHQSYSSHPDRFSGWFPQVLSRESLTGRCYWEVEWRGRGVEVAVS
YKNIIRTGNECVFGSNNKSWALRCDNTSYNFWYNKVQTPVSGPESSRLGVYLDHRAGILS
FYSVSGTMTLLHRVQTTFTQPLYAGLRFYYYGDTAEFCKLK
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcagacctgaagtcagagtctcttctgaggaagtgaaactcagacactcgttg
ttaccgagaggtgaaatggagcccaaaggagatcagctggaccgggagaccttctcttgt
tccatctgtctggatctcctgaaggatccggtgactattccctgtggacacagctactgc
atgaactgtattaaagaccactgggatgaagaggacgggaagaagctcctcagctgccct
cagtgtaggcagaccttcacaccgaggcctgtcctgctgaagaacaccatgttggcagtt
gtagtggagcagctgaagaagactggactccaagctgctcctgctgatcactgctatgct
ggacctgaagatgtggcctgtgatgtctgcactgggaggagactgaaggccttcaagtcc
tgtctggtgtgtctggtttcttactgtgagaaacacctccagcctcattgtgatgtacct
caattaaagaaacaccagctggtggacccctccaaccagctccaggagaacatctgctct
cgtcacgacgaggtgatgaagatgttctgccgtactgatcagcagtgtatctgctacctc
tgctctctggatgaacataaaggccacgacaccgtctcagctgcagcagaaaggaccgag
aggcagagagagctggaggggagtcgactaaacatccagcagagaatccaggacagagag
aaagacctgaagctgctccatcaggaggtggaggccatcaacctctctgctgataaaaca
gtgaaggacagtgagaagatcttcactgagctgatccgtctcatgaagaaaagaagctct
gatgtgaagcagcaggtcagatcccagcagagaactgaagtgagtcgagtcaaagagctt
caggagaagctggagcaggagatcactgagctgaagaggaacgacgctgagctgcagaag
ctctcacacacagaggatctccaccagcttctccaccactacccctcactgtcaccactc
agtgggtctacagactcatccagcatcaacatccgtcctctgaggtactttgaggacgtg
acggcggctgtttcaggactcagagatgaactacaggacgtcctgagagacaagtggaca
aacgtctcactgacggggactgaagtggatgttttactgtctgcaccagagcccacgacc
agagatggattcttaagatgttcacgtgaactcactctggatccaaacacagcaaacaca
cagctgttattatctgatgggaacagaaaagcaacttttatgaatgaacatcagtcttat
tctagtcacccagacaggttcagtggatggtttcctcaggtcctgagtagagagagtctg
actggacgttgttactgggaggtggagtggagaggaagaggagttgaagtagcagtttca
tacaagaacatcatcagaacagggaatgaatgtgtgtttggatccaataacaaatcttgg
gctttacgttgtgacaataccagttataacttttggtacaacaaagtccaaacccccgtc
tctggtcctgagtcctccagactaggagtgtacctggatcacagagcaggtattctgtcc
ttctacagcgtctctggaaccatgactctcctccacagagtccagaccacattcactcag
cctctctatgctggacttaggttttattattatggagacactgctgagttctgtaaactc
aaatag
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