Cyclopterus lumpus (lumpfish): 117730806
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Entry
117730806 CDS
T09199
Symbol
rpn2
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00510
N-Glycan biosynthesis
clum00513
Various types of N-glycan biosynthesis
clum01100
Metabolic pathways
clum04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
117730806 (rpn2)
00513 Various types of N-glycan biosynthesis
117730806 (rpn2)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117730806 (rpn2)
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Gene cluster
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Motif
Pfam:
Ribophorin_II
Motif
Other DBs
NCBI-GeneID:
117730806
NCBI-ProteinID:
XP_034388690
Ensembl:
ENSCLMG00005019160
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Position
5:3993087..4001006
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AA seq
631 aa
AA seq
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MERSRLFGLFVLSLALAGAQALTPAHYLSLPDVARLQNLLSQQFTGLDSAYYSVVGLSKL
GATIPDHEGVCQFLKSQLDPMSIDSLFFAAETSQAISGCEIPVSNETRDILLAAVSEDST
MTQIHRAVSALSSLGLPLASQEVVGALTGRINKEDNVMAITLALQTAARLSQQTELGGIL
EEIEDLTARLDDLGGIYLQFEEGLEATALFVTAAYSLSDHVDMEPPLKEDQVIQLVNSIF
SKKSWDSLAEAFSVASAAAALSNNRFHVPVIVSALGPATVSHSQPTLQLLVTDVMSQPLA
LANVLVESAYSVASKSVILSHASFTLNDGVFELNFMSSRPASGYYQFAVAVTGDTRLVGN
HVELKVKVSTEVVVNNMDLSVVDKDQSIGTKTTRVDYPSKGKSSFTADSHQNFAMAFQLV
DVNTGVELTPHQTFVKLHNQKTGQEVVFVAEPDSKNLYKFELDIGERKSEFNSISGTYSL
HLIVGDATLENPILWNVADVVLKFVDEEAPVAIQPKTLYVPKPEIQHLFREPEKKPPTVV
SNTFTALILSPLLLLLILWLKLGANISNFSFTPSTILFHVGHAAMLGLMYVYWTHLNMFQ
TLKYLAIIGSVTFLAGNRMLAQIAVKRIEKK
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggaacggtctcggctgtttgggttgttcgtgctcagcctggctctcgctggagctcag
gcgctcacaccggcgcactacctctccctgcccgatgtggcccggctacagaacctcctg
agccaacaattcaccggtctggactccgcgtactactcggtcgttggtctgtccaagctc
ggggcgaccattcccgatcacgagggagtatgccagtttctcaaatcccagctggatccc
atgagcattgactctctcttcttcgctgccgagaccagtcaagccatttcaggatgtgag
atccctgtgtccaatgagacgcgagacatcctcctggcggcggttagtgaggattccacc
atgactcagattcacagggcggtgagtgcactcagctctctggggcttcccctggcctcc
caggaagttgtgggggctttgaccggtcgcatcaacaaggaggacaacgtcatggctatc
actttggctctgcagaccgcagcacgcctgtcccagcagacagaactgggaggcatactg
gaggaaattgaggatctcacggctcgtttggatgatctcggtggcatctacctccagttt
gaggagggactcgaggcgactgccttgtttgtgacagctgcttattccctgtccgatcac
gtggacatggagccccctctgaaggaggaccaagtcatccagctggtgaactccatcttc
agcaagaagtcctgggactctctggccgaggccttcagcgtggccagtgccgccgccgct
ctctccaacaaccgcttccacgtgccggtcatcgtcagtgctctgggccctgccacggtg
tctcacagtcagccaaccctgcagctccttgtcactgatgtcatgtctcaacctctggcc
ctggccaacgtgctggtggaatctgcgtacagcgtggcctccaagagcgtcattctaagc
cacgcttcattcacacttaatgatggcgtctttgaactgaacttcatgtccagccggcca
gccagcggatattaccagtttgccgttgcagtgactggggatacccggcttgttggcaat
cacgttgagctcaaagtaaaggtgtccactgaggtggtcgttaacaacatggacctctct
gtggtggacaaggaccagagcatcggcacaaagaccacgagggtggactatccttccaaa
ggcaagagctccttcacagcagacagccaccaaaactttgccatggccttccagctggtc
gatgtcaacaccggagtggagctgacccctcaccagaccttcgtcaagctgcacaatcag
aaaactggccaagaggtcgtgtttgtggccgaacccgacagcaagaatctgtacaagttt
gagttggacatcggcgagcgcaaatcagagttcaactctatttccggcacctactccctc
cacctcatcgttggggatgctactttggagaatcccatcttgtggaatgtggctgacgtt
gttctgaagttcgtggatgaagaggctccagtggccattcagcccaagacactttatgtg
cccaaaccagagatccagcacttattcagggaaccagagaagaagcctcccacggtggtt
tctaacaccttcactgcactcatcctgtctcctttacttcttctgctcatcctgtggctt
aagctcggagccaacatctccaacttcagcttcactcccagcaccattctgttccacgtg
ggacacgcagccatgctgggcctgatgtacgtctactggactcacctgaacatgttccag
actctgaagtacctggcgatcattggcagtgtgactttcctcgccgggaaccgtatgctg
gcccagatagccgtgaagagaattgagaaaaaataa
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