Cyclopterus lumpus (lumpfish): 117730898
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Entry
117730898 CDS
T09199
Symbol
bap1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase BAP1
KO
K08588
ubiquitin carboxyl-terminal hydrolase BAP1 [EC:
3.4.19.12
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117730898 (bap1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
clum01002
]
117730898 (bap1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117730898 (bap1)
03036 Chromosome and associated proteins [BR:
clum03036
]
117730898 (bap1)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117730898 (bap1)
Peptidases and inhibitors [BR:
clum01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
117730898 (bap1)
Ubiquitin system [BR:
clum04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
117730898 (bap1)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
117730898 (bap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C12
UCH_C
Motif
Other DBs
NCBI-GeneID:
117730898
NCBI-ProteinID:
XP_034388849
Ensembl:
ENSCLMG00005002869
LinkDB
All DBs
Position
5:complement(15105169..15112265)
Genome browser
AA seq
738 aa
AA seq
DB search
MNKGWLELESDPGLFTLLVEDFGIKGVQVEEIYDLQSKCQSPVYGFIFLFKWIEERRSRR
KVNTLVDETSVIDEEIVNDMFFAHQLIPNSCATHALLSVLLNCSGVELGTTLSRMKAFTK
GFSPESKGYAIGNAPELARAHNSHARPEPRHLPEKQNGISAVRTMEAFHFVSYVPIKDRL
FELDGLKAYPIDHGPWGEEEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRMK
YESKLEILKRNRQTVLEGLQKMIRLTQPELVQDKKQQESSSVDDNPTAIKKEADVEPVTS
QGANSVDESGDQSKDAPSPSGNAKIMGKPPVPRGGGPQQVTSPNPIVQRLPAFLDNHNYA
KSPMQEEEDLAAGVGRSRVAVTPKPQSSDDEDDYEDEEEEVTGSAGTSNRFRRKAGLRSR
PVRTGTGMESQIALTVLAEKLKKEAQRKDALNTPLSVRTEGRTGGICITSASQPSPTPSN
ESTDTASEIGSAFNSPLRSPARSQAATRPSSPVASHLSRVLFGEDEMLRLDSRHNRAVRE
LGPSVSAALLHLQEDGIIFALPPSDLAADGTKRPHSLEKIKDLSAAEKGGVNEGDEGPSV
EIKQESSKDGAEVRPSKEKPNASETTADSKPHGDKYSPKELLALLKCVEADIANYEVYLK
EEVEKRKKYKIDDQRRTHNYDEFICTFISMLAQEGMLASLVEQNISVRRRQGVSIGRLHK
QRKPDRRKRSRPYKAKRQ
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagggtggctcgagctcgagagtgatccaggactcttcactctgctggttgaa
gattttggtatcaaaggtgttcaagtagaggaaatctatgatcttcaaagcaaatgtcaa
agccctgtctatggcttcatcttcttgttcaagtggattgaggaacgtcgatccaggagg
aaagtcaacactttggtggatgagacttctgtcattgacgaggaaattgtaaatgatatg
ttctttgctcatcagcttataccaaattcatgtgccacccacgctttattgagtgtgctt
ctgaactgcagtggcgttgagctcggcaccacccttagtcgcatgaaggctttcacaaaa
ggctttagtccagagagtaaaggttacgcaataggaaatgccccagagcttgccagagca
cataacagccacgccagaccggagcccaggcacctgccggagaaacagaatgggataagt
gcagtgcgaactatggaggcattccactttgtgagctatgtgcccatcaaagaccgcctc
tttgagctcgatggactcaaggcgtaccccattgatcacgggccatggggtgaggaggag
gaatggaccgataaagctcggcgggttatcatggagaggattggcctggccactgctggg
gagccgtaccatgacattcgcttcaacctcatggcagtggtgcctgaccgcaggatgaag
tatgagtccaaacttgaaattctaaagaggaatcgacagactgttctggagggtctacag
aagatgatccggctcactcagcccgagcttgtccaagacaagaagcagcaggagtcttcc
tccgttgatgataaccccactgcgatcaagaaagaggcagatgtggagccagttacatcc
cagggggctaattcagtggatgagtctggagatcagtctaaagatgcccctagcccttca
gggaacgctaagatcatgggcaaaccaccagtccctagaggaggaggtccccagcaagtc
accagtcccaaccccattgttcagcggctgcctgccttcctggacaaccacaactatgcc
aagtctccaatgcaggaagaggaggatcttgctgcaggagttggacgctctcgagtggca
gtgacgccaaaaccccaatcctccgatgatgaagatgattatgaggatgaggaggaggaa
gtaactggttctgcaggcacatccaacaggtttagacggaaggcaggtctgcgatcacga
ccagtacggacagggactggaatggagagccagattgccctcactgtattggctgagaaa
ctgaagaaggaagcccaaaggaaagatgccctaaatacacccctttctgtacgcacagaa
gggcgcacaggaggcatttgcatcacatctgcttcacagccttcccccacacccagcaac
gaaagcactgacacagcctctgagatcggcagcgccttcaactccccgctacgctcaccc
gcacgctcccaagctgccacgcgtccatccagtccagtcgcatcccatctgtctcgtgtt
ctgtttggagaagatgagatgctcagactagactccagacataaccgcgcagtaagagaa
ctaggtccctctgtcagcgcagccttgttacacctgcaggaggatggcatcatctttgct
ctccctccatctgatttggctgctgatggcacaaagcggcctcactctcttgagaagata
aaagacctctcggcagcagagaagggaggcgtgaatgagggagatgagggaccatctgtg
gagataaaacaagagtcgagcaaggatggagcagaggtgaggcctagcaaggaaaagccc
aatgcttcggaaacaacagcagacagcaagccccatggggataagtactctcccaaagag
ctgcttgcactgctcaagtgtgtggaagccgacattgccaattatgaggtgtatctaaag
gaggaagtagaaaagagaaagaagtacaaaattgatgatcagaggaggacccataattac
gatgagttcatctgcacctttatatcaatgctggcccaagaaggcatgttggctagcctt
gtggagcaaaacatttctgtgcgtcgtcgccagggagtgagtatcggccggttgcacaaa
cagaggaagccagatcgtaggaaacgctcccgaccgtacaaagccaagcgccagtaa
DBGET
integrated database retrieval system
