Cyclopterus lumpus (lumpfish): 117732317
Help
Entry
117732317 CDS
T09199
Symbol
shank3a
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
clum
Cyclopterus lumpus (lumpfish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SH3_2
SAM_2
SH3_9
Ank_3
Ank_5
SH3_1
PDZ
PDZ_6
FERM_f0
SAM_PNT
SH3_3
Motif
Other DBs
NCBI-GeneID:
117732317
NCBI-ProteinID:
XP_034391098
LinkDB
All DBs
Position
6:complement(14303366..14438694)
Genome browser
AA seq
1973 aa
AA seq
DB search
MPLRPAAGKHEPPSPPRQDQQQQQHTYTHSNTLAQPYTHTANGSQGASTDSGSSREEDSG
VPIPVGVTAFRPGAERSHSSRAPMEEPTGNTVVIRIGIPDLQQTKCMKFNVDAPIWLSKQ
RILCTLNQSLKDVLNYGLFQPAYNGKAGKFLDEERELREYPFPSIAPVPYLEFRYKRRVY
TQTHLDEKQLSKLHTKANLKKFMEYVQQRNIDKVSRFLEKGLDPNFHDPDTGECPLTLAA
QLEGCADLIKVLKTGGAHLDFRTKDGITALHKAVRGKNHTALITLLDLSASPDYKDSRGL
TPLYHSSMVGGDPYCCELLLYDHAQVGCVDENGWQEIHQACRYGHVQHLEHLLFYGADMT
AQNASGNTALHVCALYNQDSCARVILFRGANKEIKNYNSQTAFQVAIIAGNFDLAEIIKV
HKATDVVPFRETPSYTNRRRVTPGPLPSPRSLLRSASDNNLNGDHDYIRGQAPREIRGRQ
GHSPVPSLRSLPAFAQQHSSLGESRHGDIPDSSLQSTGSSRSSHSRSPSLHHMHEEDRPV
PRRSHSHGYPQGHGHRGRLSPGSVQRDPSPPHHTPPALTGPRGPKRKLYSAVPGRAFIVV
KPYTPQGEGEIQLNRGERVKVLSIGEGGFWEGTVKGRTGWFPADYVEEVQMRQYDPRLET
REDRTKRLFRHYTVGSYDNFTSYSDYIIEEKNAVLQKKENEGFGFVLRGAKAETPIEEFT
PTPAFPALQYLESVDVEGVAWRATLRTGDFLIEVNGVNVVKVGHKQVVSLIRQGGNRLLM
KVVSVTRKPESEEVVRKKAPPPPKRAPSTTLTLRSKSMTAELEELASARRRRGERLDEML
ASQESILRSQPSEPDYRAATVKQRPTSRRITPAEISSLFERQGMTLHGGLHPGIERGHIP
LPKGMSRTKSFGATEEDRLSALAGEHRFPRSSSMTDTLREHSQPHPIPPPPQTAPPPPPY
YLDTGPPPAFCPPPPPSRTQSQGHEPGGRSSFKPSSLDLPYEAAQRQATHIERQKKARSM
IILQDSSHLPVEPTEIPRPSAATPPERIKRKGRVIDNPYANVGQFSIGLYTPTKPQRKKS
PLVKQLQVEDAQEKASLALAAAHSRESSPSGRHPYTHGHTHTSRADYYQQQLMAERERIR
AQGEMMFQGKGPFAAAIAGAVKDRERRLEERRKSTVFLSVGTMEGASTTSSDSPSLTQSH
SIDERMLTRELGHLPPPALALSPSPSGTTFIHPLTGKPLDPNSPLALALAARERALTSQS
QSPTGSPEPRTKQERAVFIDPQTKESPHGEGAPTTPLFSPISAKAAGYGVGSSPASILVP
QTTKPQWAASPSPLSFRKEMEARVEERKEEKRLEDKKSMLISIMDTSQQKTAGLIIVHAT
SNGQGVGVVSELEQTPDPTSMEPNKSPSPRAKSPSPMVSQAQLQAQPQTQRPASPAQDKG
LAQGSSEEDVDPYTVTLPPAMLSSSDEETREDLRKIGVVPPPDEFANGLLAQAQGTPVSP
SKPACSPTTPTTPTRKTSSTPTTPTLTPTQPQPPQPAPLPSAAVVSGKPSDPLEPPPVGE
SGSAVDSGMEEADTRSSSDRDHHLETTSTVSTVSSISTLSSESGEPADTHTTHTSYADGQ
TFVLDKPPVPPKPRLKSQIGGSKGPVTFRDPLLKQSSDSELLSQQQAAALAAAAAGGAGL
PAGGSASMTGLVPSKPRYLFQRRSKLWGDPVETRGPGVGLGIGSLGNLGGLGLGLGLDEA
AKPSVMGELSSRLQQLNKDTRSLGEEPMGASFDPGRKSPVAGARLFSSLGELHTISQRSY
GTTFTIRPGSRYPVARRTQSPGSGSPDRGDPLGRFSSFGLPTSPTTPPQTILKSSSLSLP
QEPKEVRFVMRSSSARSRSRSPSTSPSHSPGLGSPLLALRPFHQKPLHLWNKYDVGDWLE
SIHLGEHRAGFQEHEIEGSHLPALTKEDFAELGVTRVGHRMNIERALKMLLES
NT seq
5922 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcgtccggcagccggcaaacatgagccacccagccctccacggcaggaccag
cagcagcagcaacacacatacacacactcaaacacactcgcacagccttacacacacaca
gcaaacggcagccagggggccagcactgacagcggcagctcccgggaagaggacagcggt
gttcccattcctgtcggtgttactgctttccgtcccggtgcagagcggagccacagttca
agagcacccatggaagagccgacaggcaacaccgtggtcatccgcattggaatcccagac
ctacaacagacgaaatgtatgaaattcaatgtggatgctccgatctggctgtccaagcag
cggatcctctgtactctcaaccagagcctgaaggatgtactcaactatggcctattccag
ccggcctacaatggcaaggctggcaagtttctggatgaggagagagagctaagggaatac
cccttcccatccatcgctcctgtaccttacctggagttccgctataaaagacgtgtctac
acccagactcacctggatgaaaagcagctgtccaagctccatacaaaggcaaacctgaag
aagtttatggagtatgtgcagcagaggaacattgacaaggtctcaaggtttctggaaaaa
ggcctggaccccaacttccatgatccagacacaggagaatgtcctctaacgctggcagcc
cagctggagggatgtgcagatctcatcaaggtgctgaagactggaggggctcatctggac
ttcagaacaaaagatggcattactgccctacacaaggcggtgcgcggcaagaaccataca
gcacttataacgctgttggacttgagtgcatcgcctgactataaagacagtagggggttg
actcctctctaccacagctcaatggtaggaggggacccctactgctgtgagctgctgctg
tatgatcatgcacaggttggctgtgtggatgagaatggctggcaggagatacaccaggca
tgccgctatggccacgtgcagcacctggaacacctgctgttctacggagccgacatgacc
gcccagaatgcatctggaaacactgcactgcatgtgtgtgctctctacaaccaggatagc
tgtgcacgagttatcctgttccggggggccaataaagagataaagaactacaacagccag
accgcctttcaggtggctattatagcaggaaactttgatctggctgaaattataaaggtc
cacaaagcaacggatgttgtgcctttcagggagaccccttcctacaccaaccgccgacgt
gtgacgcctggccccctgccctcgccacgttccttgctccgctctgcaagtgacaacaac
ctgaacggagaccacgattacatccgcggtcaggcccctcgagaaattcgtggccgtcag
ggtcactcccctgtcccttcactgcgcagtctgccagcttttgcacagcagcacagcagc
ctaggagagagccgtcatggagatatccctgacagcagtctccagagtacgggcagctcc
agatcctcccattcccgctcgccttcactacatcacatgcatgaagaggacaggccagtt
cccagaaggtcccacagccatggctacccccaaggacacggccatcgtggaagactcagt
cctggctcagtgcagagagacccaagcccccctcatcacacgcctccagcactgacgggc
ccccgtgggcccaaacggaaactctacagtgctgtcccgggacgtgccttcattgtggtc
aagccctacacgccacaaggggagggggagattcaactcaaccgtggagagagagtcaaa
gttctgagtataggggaaggaggtttctgggaaggcacggtcaaagggaggacaggctgg
ttcccagcagattatgtggaagaagttcagatgaggcagtatgaccctcggctcgagacc
cgggaggaccgcactaagagactgttcagacactacactgtgggatcttacgacaacttc
acctcctacagtgactatatcatagaggagaagaatgctgttttacagaagaaagaaaat
gaggggtttggttttgtgctgcggggagccaaagccgagacgcccatcgaggagttcacc
cccaccccagcgtttcctgcccttcagtatctggagtctgtggacgtggagggagtggcc
tggcgggctactctgaggacaggagacttcctcattgaggtaaacggggtaaatgtagta
aaggtgggccataagcaggtggtgtccttgatccggcaggggggaaacaggctgctgatg
aaggtggtgtctgtgacacgcaaacctgagtctgaggaagttgttcgcaagaaagcgccc
ccaccacccaagagagctcccagcaccaccctgacactgcgctctaagtccatgaccgct
gagctggaagaactggcttctgctcggaggagaagaggagagagactagatgagatgttg
gcatcccaggagtctatcttgcgttctcagccctcagagccagattacagagcagctact
gtcaaacaaaggcctaccagcaggagaataacaccagcagagatcagttcactgtttgag
agacaagggatgactcttcatggaggccttcacccaggcattgagagaggtcacatacca
ctaccaaaggggatgtccaggaccaagtcttttggtgccactgaggaggatcggctgtct
gcccttgcaggcgagcacagatttccccgcagttcctctatgacagacactctccgggag
cactcacagccccatcccatccctccaccaccacaaacagcacctcctcctcccccctac
tacctagacactggtcctccaccagccttctgtccccctcctcccccatctaggacccag
agtcagggccatgagcccgggggacgctccagcttcaagccctcctccttggacctgcct
tacgaggccgctcagcggcaggccacacacatagagagacagaagaaagcccgctccatg
atcatcctccaggactcttcacatctacctgtagaacctacagaaattccccgtccttct
gctgctactccacctgagcgaatcaaaaggaagggtcgggttattgacaacccttatgcc
aatgtgggacaatttagtattggactgtacacacccaccaagccccagaggaagaaaagt
cccttggttaaacaactacaggtggaagatgcacaagaaaaagctagtttggccttagct
gctgcccactccagagagagctcaccctcaggacgacacccatatacccatggacacaca
cacaccagccgtgcagactactaccagcagcagctgatggctgagcgagagcgtattcgt
gcccagggagagatgatgtttcagggtaagggccccttcgccgctgcaatagctggagca
gtgaaagaccgtgagcgtcgcctagaagaacgaaggaaatccactgtcttcctttctgtt
gggaccatggagggggcgtctaccaccagctctgactccccctctctgactcagtctcac
tccatcgatgaacgaatgctcaccagagagctgggacatctgcctcccccagccttggct
ctgagcccctcccctagcgggaccacttttatccatccgctcacaggaaagcccctggac
cccaactctccactggctcttgcgctggccgcaagggagagagcactgacctcccagagc
cagtccccaactggcagcccagagcctaggactaaacaggagcgggcagtatttattgac
cctcagaccaaagagtctccacatggtgaaggggcacccacaactccccttttttcgcct
atcagcgccaaggcagcgggttatggagttggatcctccccggcatctattttagttccc
cagaccacaaaaccacagtgggcggcatcaccatcacctttatcattcaggaaggagatg
gaggccagagtagaggagaggaaggaagagaagagactagaggataaaaaaagtatgttg
attagtattatggatacgtcgcagcagaaaacagcagggcttatcatagtccatgctacc
agtaatggccagggtgttggggtggtttcagaactagagcagacacctgacccaacatct
atggagcccaacaaatctccaagtccacgggctaaatctcccagtcctatggtctcccag
gcccagctccaggcccagcctcaaactcagcgtcctgccagtccagctcaagataaaggc
ctggctcagggaagctctgaggaggatgtggatccgtacacagtgaccctgccccctgca
atgttgtcctccagtgatgaggaaacaagggaggatctacgtaagattggagttgttcca
ccaccagatgagtttgctaacgggctgttggcacaggcacaggggaccccagtgtcccca
agtaaaccggcctgctctcccaccaccccaacaacaccaacacgcaaaacttcctctacc
ccaacaaccccaactttgacacccacccagcctcagccaccccaaccggcacctctaccc
agtgcagcagttgtctcagggaagccctctgaccctctagagcccccgccggtgggcgag
tctggctctgcggttgactcaggcatggaggaggctgacacgcgtagctccagtgaccga
gaccaccatctcgagaccaccagcacggtctccaccgtctccagcatatccacattgtcc
tcagaaagcggcgagcctgccgacacacacaccacgcacacctcctatgccgacgggcag
acttttgtgctcgacaagccgccagtgcctcctaagccccgactcaagtcccaaatagga
ggcagtaaaggccctgtcaccttcagggaccctctgctgaagcagagctctgacagcgag
ctgctatcacaacaacaggctgctgctctggctgctgctgcagccggaggagctgggctg
cctgcaggtggttcagcctcaatgactggactagtcccttccaagccacgctacctcttc
cagcggaggtccaagctgtggggggacccagtggagactcgtggaccaggggtggggcta
ggtattgggagtttgggcaatcttggtggactgggactggggctgggtttagatgaggca
gcaaaaccatctgttatgggggagctcagttcacgactgcagcagctaaataaagacact
aggtcactaggagaggaaccaatgggagcatcatttgaccctggaaggaagtcacctgtg
gcaggtgccagacttttcagcagcttaggcgagctccacaccatttctcagagaagttac
ggcaccacattcaccattcgccctggcagccgttaccctgtcgcccgacgtacccaaagc
ccaggatcaggctcacctgatcggggcgatcctcttggacgattctctagcttcggccta
ccaacctcaccgacaacaccgccacaaaccatcctcaaatcctctagcctcagcctaccc
caagagcctaaagaggtgcgctttgtaatgaggagctccagtgcccgttcccgctcgcgc
tccccgtccacatcaccttcccattcccccggactggggtcaccacttttagccctcagg
cccttccatcagaaacccctccacctctggaataaatatgacgtgggagactggctcgag
agcatacatctgggggagcacagagcagggtttcaggaacatgagattgaaggctctcac
ctcccagctttaaccaaggaggactttgctgagctgggagtgacacgagtcggacaccgc
atgaacattgaacgagcactgaaaatgctgctagagagctga
DBGET
integrated database retrieval system