Cyclopterus lumpus (lumpfish): 117733380
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Entry
117733380 CDS
T09199
Name
(RefSeq) intermediate filament protein ON3-like
KO
K07605
type II keratin, basic
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clum04812
]
117733380
04147 Exosome [BR:
clum04147
]
117733380
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
117733380
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
117733380
Exosomal proteins of other body fluids (saliva and urine)
117733380
Exosomal proteins of colorectal cancer cells
117733380
Exosomal proteins of bladder cancer cells
117733380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Keratin_2_head
TPR_MLP1_2
CENP-F_leu_zip
ADIP
FPP
BRE1
Crescentin
DUF745
COG6_N
Laminin_II
Tropomyosin
DUF4349
Alanine_zipper
COG5_N
Phage_GP20
Ribosomal_S30AE
Motif
Other DBs
NCBI-GeneID:
117733380
NCBI-ProteinID:
XP_034392881
Ensembl:
ENSCLMG00005007585
LinkDB
All DBs
Position
7:complement(3544047..3549102)
Genome browser
AA seq
563 aa
AA seq
DB search
MTSYKSSSYSVRSSSAPRNFSSNSYSGSGGISSRRSYNVKSSYGGGNRGFGGITSSSAYG
LNSSMGGGGGGSGMGMGFSGGMGASGMGMGYGGGMGGQAPITAVSVNRSLLAPLNLEIDP
NIQVVRTQEKEQIKTLNNRFASFIDKVRFLEQQNKMLETKWNLLQGQTTTRSNIDAMFEA
YISNLRRQLDGLGNDKMKLEADLHNMQGLVEDFKNKYEDEINKRTECENDFVLIKKDVDE
AYMNKVELEAKLESLTDEINFLRSIYEEELRELQGQIKDTSVIVEMDNSRNLDMDSIVAE
VKAQYEDIANRSRAEAETWYKSKYEEMQTSASRYGDDLRSTKTEISDLNRMIQRLTSEID
SIKGQRANLEAQIAEAEERGEMAVKDAKARIRDLEEALQRAKQDMARQIREYQDLMNVKL
ALDIEIATYRKLLEGEEDRLATGIKSINISQQSTSYGGFPMEKSSYSSGYSSGFSGGYGG
GYGGGMSGGSMSGGYSSGGGYSSGGGYSSGGGGGGYSSGAGFSSGSTGGGSYSTSQSKKN
VVIKMIETRDGRVVSESSEVIED
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaccagttacaagagcagcagctacagcgtgaggagttccagcgccccacgaaacttc
agcagcaactcctactccggatcgggcggcatcagcagccgcaggagctacaacgtcaag
agttcctatggaggaggcaacaggggcttcgggggcatcaccagctcctctgcctatggt
ctgaactcaagcatgggcggcggcggcggaggcagtggcatgggcatgggcttcagcggt
ggcatgggtgcatcaggcatgggtatgggctacggcggtggcatgggcggtcaggcccct
atcaccgccgtgagtgtgaacaggagcctgttggcccccctgaaccttgagattgacccc
aacatccaagtcgtccgcacccaggagaaggagcagatcaagaccctcaacaaccgcttc
gcttccttcattgacaaggttcgcttcttggagcagcagaacaagatgctggagaccaag
tggaacctgctgcagggacagaccaccacccgctccaacatcgacgccatgttcgaggcc
tacatctcaaacctgcgcaggcagctcgacggcctgggcaacgacaagatgaagctggag
gccgacctgcacaacatgcagggcctggtggaggacttcaagaacaagtatgaagatgag
atcaacaagcgcacagagtgcgagaacgactttgtcctcatcaagaaggatgtcgatgag
gcctacatgaataaggttgagctggaggccaagctggagagtctgacagatgagatcaac
ttcctcaggtcgatctatgaggaggagcttcgtgagctccagggacagatcaaggacact
tcagtcatcgtggagatggacaacagccgcaacctggacatggactcaattgtggctgaa
gtcaaggcccagtatgaggacattgccaaccgcagccgcgccgaggcggagacgtggtac
aaaagcaagtatgaggagatgcagacgtccgccagcagatacggagatgacctcaggtcc
accaagacagagatctcagacctcaatcgcatgatccagcgactgacatcagagattgat
tccatcaagggacagcgtgccaacctggaggcccagatcgccgaggcagaggagcgcggg
gagatggcagtgaaggacgccaaggcccgcatcagggacctggaagaagccctgcagaga
gccaagcaggacatggcccgccagatcagagagtaccaagacctgatgaacgtcaagctg
gctctggacattgagatcgcgacctacaggaaactgctggaaggagaggaggacaggctg
gcgactggcatcaagtccatcaacatttcccaacagagcacaagttacggtggtttcccc
atggaaaagagcagctactcaagcggctactccagcggtttcagcggcggctatggaggt
ggatacggcgggggcatgagcggtggtagcatgagcggcggttacagcagcggcggcggt
tacagcagcggcggcggttacagcagcggcggtggcggcggcggctacagcagcggcgcc
ggattcagcagcggcagcaccggcggcggcagctacagcaccagccagagcaagaagaac
gttgttatcaagatgatcgagacccgggacggcagagtggtgtccgagtcctctgaggtc
attgaggattga
DBGET
integrated database retrieval system
