Cyclopterus lumpus (lumpfish): 117735436
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Entry
117735436 CDS
T09199
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117735436
Spliceosome [BR:
clum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117735436
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
117735436
NCBI-ProteinID:
XP_034395946
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All DBs
Position
8:complement(13954006..13990251)
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AA seq
463 aa
AA seq
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MLMSTDVASLMLPVSRGIMERDIDTAAGPLANEDGGLAAAAAVRGMKRGDPEPDAQAAAA
VLTEAECKRPKIDGTGAVVDDIGQNNEPLNPGFHGYPPHSQGSQDSTGGQEGLVAPPFSA
FPPPPPPQNGLPGTEFGPGAMFGAGGAADVGAGANGAASTTAAASSNNGKTEEVPQGETG
VLCGTGSTGGDGSVGDPSEAKGSPKRLHVSNIPFRFRDPDLRQMFGQYGKILDVEIIFNE
RGSKGFGFVTFETSADAEKAREKLHGTLVEGRKIEVNNATARVMTNKKMVSPYPNGEALS
TLPYAAGWKLSPMMGAMYGPEIYAVPGFPYPSAAAAATTAAAFRGAHLRGRGRPVYSAVR
AAVPQPAIPTYPGVVYQDGFYGAADLYGGYPAAAAAAAAAAAYRYAQPTAVTGATAAAAA
YSDSYGRVYTTDPYHALSPAAAAYGVGAMASLYRAGYSRFAPY
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcttccttaatgctgcccgttagtcggggaataatggaa
agggacattgatacggcagccggaccactcgcgaacgaggacgggggtctggcagcagct
gcagctgtccgtgggatgaaacgaggagacccggagcccgacgctcaggcggccgctgcg
gtcctgaccgaggcggagtgcaaaagacccaagatagacgggaccggggctgttgttgat
gacattggacagaacaatgagcctttaaatcccggtttccacggatacccacctcacagt
cagggctctcaggattcgacaggaggacaggagggattggtggccccacccttttcagcg
ttcccccctccgccccctcctcaaaacgggctgccagggacagagtttggccccggggcc
atgtttggtgctgggggcgcagcagacgtaggggctggtgctaacggagccgcctccacg
accgccgccgccagcagcaacaacggaaagacggaggaggtgccccagggtgagacaggt
gtactatgtgggacgggaagcacggggggagacggctctgtgggagacccctcagaggcc
aaagggtcccccaaacgccttcacgtctcaaacatccccttccgcttccgggaccctgac
ctcaggcagatgtttgggcaatatgggaagattctggatgtagagataattttcaatgag
aggggctctaagggttttggctttgtgacatttgagaccagcgcagacgcagagaaagcc
agggaaaagctccacggcacgttggtggaaggccgtaagattgaggtgaataacgccacc
gccagggtgatgaccaacaagaaaatggtcagcccctaccctaacggagaggctctcagc
acgctgccttatgcagcggggtggaaattgagtcctatgatgggggccatgtacggacct
gagatctacgccgtcccagggttcccatacccctcagcggctgcagcagccactacagca
gcggcgttccgcggcgcccacctccggggccgaggccggcccgtctacagcgcagtgcgg
gccgccgtgcctcagcccgccatccccacctaccccggtgtggtgtatcaggatgggttt
tacggagctgccgacttatatggaggctacccagctgctgctgctgctgctgctgctgcc
gccgcgtatcgctacgcccagcccacggccgtaaccggagcaaccgccgcagctgccgcc
tacagtgacagttatggccgggtgtacactacagatccataccacgccttgagtccggcc
gctgctgcctacggagtgggagccatggccagtttataccgggcaggctacagtaggttc
gccccgtactaa
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