Cyclopterus lumpus (lumpfish): 117736158
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Entry
117736158 CDS
T09199
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117736158
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117736158
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_10
zf-RING_6
Prok-RING_4
Gp58
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
117736158
NCBI-ProteinID:
XP_034397167
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All DBs
Position
9:2694326..2696638
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AA seq
580 aa
AA seq
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MLFRPEVKVSSEEVKLRHSLLPRGEMEPKGVQLDQETFSCSICLDLLKDPVTIPCGHSYC
MNCIKDHWDEEDGKKLLSCPQCRQTFTTRPVLLKNTMLAVLVEQLKKTGLQAAPADHCYA
GPEDVGCDVCTGRRLKAFKSCLVCLASYCEKHLQPHYDAPPLKKHQLVDPSNQLQENICS
RHDEVMKMFCRTDQQCICYLCSVDEHKGHDTVSAAAERTERQRELEGSRLNIQQRIQDRE
KDLKLLHQEVEAINLSADKTVEDSEKMFTELIRLMENRSSDVKQQVRSQQRTEVSRVKEL
QEKLEQEITELKRNDAELKLLSHTEDLNQLLHHYPSLSPLSGSTDSSSINIRPLRYFEDV
TAAVSGLRDELQDVLRDKWTNVSLTGTEVDVLLSAPEPTTRDGFLRCSCDITLDPNTANT
RLLLSDGNRKGTFMKEHQSYSSHPDRFSRCPQVLSRESLTGRCYWEVEWRGGGVYVAVSY
KNIMRTGDECMFGFNNKSWALYCLNNSFIFVHNKVPTPVSGPPSSRLGVYLDHRAGILSF
YSVSETMTLLHRVQTTFTQPLYAGLRFYSSGDTAEFCKLK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcagaccagaagtcaaagtctcttctgaggaagtgaaactcagacactcgttg
ttaccgagaggtgaaatggagcccaaaggagttcagctggaccaggagaccttctcttgt
tccatctgtctggatctcctgaaggatccggtgactattccctgtggacacagctactgc
atgaactgtattaaagaccactgggatgaagaggacgggaagaagctcctcagctgccct
cagtgtaggcagaccttcacaacgaggcctgtcctgctgaagaacaccatgttggcagtt
ttagtggagcagctgaagaagactggactccaagctgctcctgctgatcactgctatgct
ggacctgaagatgtgggctgtgatgtctgcactgggaggagactgaaggccttcaagtcc
tgtctggtgtgtctggcttcttactgtgagaaacacctccagcctcattatgatgcacct
ccattaaagaaacaccagctggtggacccctccaaccagctccaggagaacatctgctct
cgtcacgatgaggtgatgaagatgttctgccgtactgatcagcagtgtatctgctacctc
tgctctgtggatgaacataaaggccacgacaccgtctcagctgcagcagaaaggaccgag
aggcagagagagctggaggggagtcgactaaacatccagcagagaatccaggacagagag
aaagacctgaagctgctccatcaggaggtggaggccatcaacctctctgctgataaaaca
gtggaggacagtgagaagatgttcactgagctgatccgtctcatggagaacagaagctct
gatgtgaagcagcaggtcagatcccagcagagaactgaagtgagtcgagtcaaagagctt
caggagaagctggagcaggagatcactgagctgaagaggaacgacgctgagctgaagctg
ctctcacacacagaggatctcaaccagcttctccaccactacccctcactgtcaccactc
agtgggtctacagactcatccagcatcaacatccgtcctctgagatactttgaggacgtg
acggcggctgtttcaggactcagagatgaactacaggacgtcctgagagacaagtggaca
aacgtctcactgacggggactgaagtggatgttttactgtctgcaccagagcccacgacc
agagatggattcttaagatgttcatgtgacatcactctggatccaaacacagcaaacaca
cggctgttattatctgatgggaacagaaaaggaacttttatgaaggaacatcagtcttat
tctagtcacccagacaggttcagtagatgtcctcaggtcctgagtagagagagtctgact
ggacgttgttactgggaggtggagtggagaggaggaggagtttatgtagcagtttcatac
aagaacatcatgagaacaggggatgaatgtatgtttggattcaataacaaatcttgggcg
ttatattgtctcaataacagttttatatttgttcacaacaaagtccccacccccgtctct
ggtcctccgtcctccagactaggagtgtacctggatcacagagcaggtattctgtccttc
tacagcgtctctgaaaccatgactctcctccacagagtccagaccacattcactcagcct
ctctatgctggacttaggttttattcttctggagacactgctgagttctgtaaactcaaa
tag
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