Cyclopterus lumpus (lumpfish): 117738990
Help
Entry
117738990 CDS
T09199
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03022
Basal transcription factors
clum03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117738990 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
117738990 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clum03021
]
117738990 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
clum03400
]
117738990 (gtf2h4)
Transcription machinery [BR:
clum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117738990 (gtf2h4)
DNA repair and recombination proteins [BR:
clum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117738990 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
117738990
NCBI-ProteinID:
XP_034401098
Ensembl:
ENSCLMG00005001746
LinkDB
All DBs
Position
11:complement(237176..247065)
Genome browser
AA seq
463 aa
AA seq
DB search
MKLRVQLQCKNLHEYLRELSPEILDRLYNHPATCLAVYRELPSLAKNYVMRMLFLDQPLP
QAALALWVKIESQKDHDECVLVLAGLRLWHSQQLQGGLQGYILNPVFKDNLRIALLGGGK
AWADEGSTLGPDRHARDIDSLDRYAIERWEVILHFMVGSPCAAVSQDLAQLLVQAGLMKS
EAGEAPYITSAGFQFLLLDTASQLWYFTLQYLNTAQSRGMDLVEILSFLFQLSFSTLGRD
YSVEGMSESLLTFLQHLREFGLVFQRKRKSRRYYPTRLAITLAAGVTTTSSSPSSSTSIP
GTGDAGFIVVETNYRIYAYTDSELQIALVALFSEMLYRFPNVVVAQVTRESVQQAIANGI
TAQQIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRLQFTEGVLYNQFLSQADFE
VLRDRAQGLGCLVWQDVAHRVMVVSPHGHSEVKRFWKRQKSNA
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaagctccgtgtccagctgcagtgtaagaatctgcacgagtacctgagggagctgagt
ccggagatcttggacagactgtacaaccacccagcaacttgtctggccgtctacagggaa
ctcccctctttggccaagaattatgtgatgcgtatgctgttcctggatcagcctctccct
caagcagctctggcattgtgggtgaaaatagaaagtcagaaggatcatgatgaatgtgtg
ttggtgttggcaggactccgcctctggcacagtcagcagctgcagggtggtctgcaggga
tacattttaaatccagtgttcaaagacaacctgaggatagcgctgctgggcgggggcaaa
gcttgggcagatgagggcagcactctgggtcctgaccgccatgcacgggacattgacagt
ctggaccgctacgccattgagcgctgggaggtcatcctgcatttcatggtgggttctccc
tgtgctgcggtcagtcaggatctggctcagctactggttcaagcaggcctcatgaaaagt
gaggcaggagaggcgccctacatcacgtcagctggtttccagttcctcctactggacaca
gcctctcagctgtggtacttcacccttcagtacctcaacactgcccagtccagagggatg
gacctggtggagatcttgtctttcttgttccaactcagtttctctactcttggcagagat
tactccgtggagggcatgagcgagtcattactcaccttcctgcagcacctgagggagttt
ggacttgtcttccagaggaagaggaagtcgaggcgttactacccaaccagactagccatc
accctggctgcaggagtcactaccacctcttcctctccctcctcctccacttccatccct
ggtactggagatgcaggcttcatcgtggtagaaaccaattatcgtatctatgcctacacg
gactcagaacttcagatcgccctggtggctctcttcagtgaaatgctgtatcgcttcccc
aacgtagtggtggctcaggtcacaagggagtccgttcaacaggccatcgccaacggcatc
acagcacaacagattatccacttcctaaggaccagagctcaccctgtcatgctcaaacag
actccagtgctgcctccaactataactgatcagattcgactgtgggagctagagagagat
cgactgcagttcacagagggagtgctctataaccagttcctctcccaggctgactttgag
gtgctgcgagacagagctcagggtctgggctgtctggtgtggcaggacgtggctcacagg
gtgatggtggtgtcgccgcacggacacagtgaggtcaagaggttctggaaacgccagaag
tctaacgcgtaa
DBGET
integrated database retrieval system
