Cyclopterus lumpus (lumpfish): 117742675
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Entry
117742675 CDS
T09199
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117742675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117742675
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117742675
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117742675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
117742675
NCBI-ProteinID:
XP_034406134
LinkDB
All DBs
Position
14:complement(18435124..18501581)
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AA seq
751 aa
AA seq
DB search
MQYHPLSLCNTSEDERQESPFITIVKMEHKVPRCLPMLDKARMALDKGAQAVIFDVSDDA
NAAAELREMDSLPSPVVLVEAEVAEELMGLVNKNEEAKVRIEIMVEQPRWPHYDVGILLT
IVLAILTIVLIFAFRYKCKSNRTWDSVHQQTMQAISRLETATYSSQGCSSSQRHRAAWGS
ASSSNSSPVCAICLEDFQDGQHLRIISCAHEFHKDCVDPWLLQHRTCPLCMHNIMGTERQ
PQRNRLQQSPEQSQGFLHPQSYSNPRNHPFPQHAIPFSMRPHYPRGPSGPYPSLGHYTGP
SAVDPQTLHFLASRPLGCGYHLPAEGPGRPHRIGGNCRTSTHHYTPRRSCQNYRSSCPAQ
RSASSSRLHHAASVAPQARGAPAHGRQDNASCSDGSYHTERSGYLADGPASDSSSGPCHG
SSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFVYYGPGSGHAPRRSSLEACAQARPR
SLDSVVNKAGCPEEQPQTVFSHIHYHRHRHHHYEEGEHSQGPSRGSDEEQGAAAAAAAAA
AAAAAPAALVLERDSPVCPPKHSPCQCPKPDPTDRPSPGTECQDHDPSSPTVPPVRVSSI
PLQLQPHCCHQGHGHPPAPLGRVGGCVLDGPSVRFHQSLDLQDDRSIHIHYGQGPGFCCS
PPDLHPAMLPVPLILDSGGMEDWPCYAGAHVVWQKRVQQARSEPQLLGPGTSMDRPPCRF
HHSPATDHNTDICLYCQTLHHNQGSEEESGV
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatcaccctctgtctctgtgcaacacaagcgaggatgaacgacaagagagtccc
ttcatcaccattgtcaaaatggagcacaaggtcccccgctgtctgccgatgctcgataag
gcccgcatggcgttggacaaaggagctcaggcggttatctttgatgtcagtgatgacgcc
aacgctgctgctgagctgcgagaaatggactccctgccgagtccagtcgtgctggtggag
gcggaggtcgccgaggagttgatgggtctggtcaacaagaacgaggaggccaaagttcgt
atcgagatcatggtggagcagcccagatggccacattatgatgtgggtatcctgctcacc
atcgtcctcgctattctgaccatcgtcctcatctttgctttccgctacaagtgcaagtcc
aacaggacctgggactctgtccatcagcagaccatgcaggccatcagtcgactcgagacc
gcaacctacagctcccagggctgctcgagctcccagcgccaccgagcggcctgggggtca
gccagcagctccaactccagccccgtctgtgccatctgcctggaggacttccaggacggg
cagcatttgaggatcatctcctgtgctcatgagttccacaaagactgcgtcgacccctgg
ctgcttcaacaccgcacctgtcccctctgcatgcacaacatcatggggacggagcggcag
ccccagaggaacagactccagcagagtccagagcaaagccagggtttcctgcaccctcag
tcttacagcaacccgcgcaaccaccccttcccccagcatgccatccccttctcgatgagg
ccccactatcctcggggaccctccggaccttatccctcgctcggccactacactggccct
tccgccgtggatccccaaacactacatttcctcgccagcaggccgcttggctgtgggtac
catcttcctgcagagggtcccgggaggccccacaggatcggaggtaactgcaggacgtcc
acgcaccactacaccccccgccggtcctgccaaaactaccgctcgtcctgtccggcccag
cgcagtgcgtccagctcacggctgcaccacgccgcctccgtcgcgccacaggcccgcggg
gcgccggcccacggcaggcaggacaacgccagctgctccgacggcagctaccacacagaa
cgcagcggatacttggccgacgggcctgcgagtgactccagctcggggccctgccacggc
tcctccagcgactccgttctcaactgtaccgacgtgtccctgcagggtgtttatggcagc
tggtccaccttccgtagctctctgagcagtgactacgatccatttgtgtattacgggccg
ggttctgggcacgccccccgcaggagcagcctggaggcatgcgcccaggctcggcccagg
tctctggattccgtggtgaacaaagccggttgccccgaagagcagccgcaaactgtgttc
agtcacatccactaccaccgccacagacaccaccactatgaggagggggaacacagccag
ggcccgagcagaggctcggacgaggagcagggggccgctgctgctgctgctgctgctgct
gctgctgctgctgcacctgctgctcttgtcctagaaagagactcgcctgtctgccctcct
aagcacagcccatgccagtgcccaaagccagaccccacagatcggcccagtcctgggaca
gagtgccaggaccatgaccccagcagccctacggtacctcctgtaagggtgtcctcaatc
cctttacagcttcaaccccactgctgccaccagggacacggacaccctcccgctcctctc
gggcgagtgggcggctgtgtgcttgatggcccctctgttcgcttccaccagagcctcgat
ctgcaggatgaccgtagcatccacatccactatggtcagggtccgggcttctgctgctcg
cctcctgatttgcaccctgcaatgctccccgtgccccttattctggactctggaggtatg
gaggactggccttgctatgccggggcccatgttgtgtggcaaaagcgggtgcagcaggcc
cgctcagagcctcagctcttggggcctgggacctctatggacagaccaccctgcaggttc
caccacagccctgctactgaccacaacacagacatttgtttgtactgccaaacattgcac
cacaatcagggatcagaagaggagtctggtgtgtga
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