Cyclopterus lumpus (lumpfish): 117744515
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Entry
117744515 CDS
T09199
Symbol
trmt2b
Name
(RefSeq) tRNA (uracil(54)-C(5))-methyltransferase homolog-B
KO
K15331
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clum03016
]
117744515 (trmt2b)
Enzymes [BR:
clum01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
117744515 (trmt2b)
Transfer RNA biogenesis [BR:
clum03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
117744515 (trmt2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
PrmA
Methyltransf_15
Ubie_methyltran
Methyltransf_11
Methyltransf_4
Methyltransf_12
Methyltransf_23
Motif
Other DBs
NCBI-GeneID:
117744515
NCBI-ProteinID:
XP_034408758
Ensembl:
ENSCLMG00005001842
LinkDB
All DBs
Position
15:complement(14532130..14535066)
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AA seq
497 aa
AA seq
DB search
MALAALHGRSVIFAKRNILYNVTVRQTRLLFSTNDTISDGQGKPPSKKQLRKSQKKPPCA
DHLSWEERLADVVTPLWRLSYDEQLELKQKRQEMILSQLSVHLTGDLQSQSSPVRSKTGF
PVLPVLPSPVRDGYRNKSTFSVNRGVDGNTKTVGFYVGTGRKGNIVCVNGDHLLNVPEKH
KLVARCYQGFIRLSPLEPCLLFHTGGHWREVTVRTNTEGRTMAIVYFHPQALTREEVAVH
KADLVEYFTLGPGSVCQLDSLLFQETTMTRCTHEESPYQLLHGQPHIYEEVLGYKFRISA
DAFFQVNQTAAEVLYSTVRHLCFPNPDDGGGGTKVGGTLLDVCCGTGTIGITISPRVDRI
IGIELIEQAVEDARHNAALNEVLNCEFIPGKAEVALPGVMSQLSSEGGGLVAAVVNPARA
GLHHRVIRALRNQPAIRRLVYVSCKPDGEAMRNFRELCCAPDPQKKLTGEAFSPTLAVPV
DMFPHTPHCEVVLLFER
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggctttggcagctttacacggcaggtcagttatatttgccaaacgtaatattctgtat
aacgttacagtgaggcaaacacgtctgttgttttcaactaatgacactatctcagatggc
caagggaaaccaccatcgaagaaacagctgagaaaaagtcagaagaaacctccctgtgcg
gatcatctgtcctgggaagaaaggctggctgatgtggtcactcctctgtggaggctgagc
tatgatgagcaactagagctcaagcaaaagcgtcaggaaatgatactgtctcagctctcc
gtgcatctcacaggtgacttacaatcacaatcatcacctgtcagaagtaaaaccggcttc
cctgtcttgcctgttctgccatcgccagtgagggatggctaccgcaacaagtccacgttt
tctgttaacagaggagtggatggaaatacaaagacagttggtttttacgtgggcacaggc
aggaagggaaacatcgtctgcgtcaacggagaccacctgctcaacgtgccggagaagcac
aaactggtagccaggtgttatcagggattcatccgtctctcgcccctggagccttgcctg
ctgttccacactgggggtcactggagagaggtcacagttaggaccaacacagagggccgg
accatggcaatagtgtactttcatccacaggcgctcacccgagaagaggtggcagtccac
aaggctgacctggtggaatactttacgctggggccgggatcggtctgtcagttggactca
ctgcttttccaggagaccaccatgactcgctgcactcacgaggaatccccataccagctc
ctgcatggtcagccacacatatacgaggaggtgctgggctacaaattccgcatttctgcc
gatgcctttttccaggtgaaccagacagctgctgaggtgctatatagcacagtgagacac
ctgtgcttcccaaaccctgacgatggtggaggaggaacaaaagttggtggtactctcctg
gacgtgtgctgtgggacaggcaccatcggcatcaccatatcgcccagagtggacagaatt
attggtatagagctcatcgaacaggccgtggaagatgctcgacacaacgcagctctcaat
gaagtgctgaactgtgagtttatccctgggaaggcggaggttgcgcttcctggcgttatg
tcccagttgagctccgaaggtggaggccttgttgcagctgtggtaaaccctgctcgagct
ggactgcaccacagagtgatccgagctttgcgaaaccaacctgctatccgcaggctggtc
tatgtttcctgtaaaccggatggggaggccatgaggaacttcagggagctgtgttgtgcc
cctgacccccagaagaaactcacaggagaggccttttctccaacactagctgtgcctgtg
gacatgttcccacatactcctcattgtgaagtggtgcttctttttgagaggtag
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