Cyclopterus lumpus (lumpfish): 117745247
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Entry
117745247 CDS
T09199
Symbol
rbfox1l
Name
(RefSeq) RNA binding protein fox-1 homolog 1-like
KO
K14946
RNA binding protein fox-1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117745247 (rbfox1l)
Spliceosome [BR:
clum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117745247 (rbfox1l)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
117745247
NCBI-ProteinID:
XP_034409332
Ensembl:
ENSCLMG00005020882
LinkDB
All DBs
Position
16:11555256..11568344
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AA seq
383 aa
AA seq
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MLSSPTVILQPYGLPIYPQATTCYPNIVQGGPSQEAGLSGGDPALSQVYAPPPSYPPPGQ
GPPTSAGRLPPLDFTSAHHSSEYPEHPQLRIYQGPQLDGADTLISSNTEDVLAPLTSDPQ
SLSVSVSSGGGAGSGSDEEGSSKAQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF
NERGSKGFGFVTFESASEADRAREKLNGTIVEGRKIEVNNATARVVTKKPQTPLVNGEIA
SSGWKINPVMGAMYAPELYTVASFPYPVATPTLAYRGSALRGRGRAVYNTIRSAAAAPAA
VPAYPQMVYQDGLYGPEVFGGYPAAYRVAQSASAATATYSDGYGRIYTAAADPYHHSVGP
TATYGVGTMASLYRGGYNRFTPY
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgctctcctcacccactgtgattctccagccttatggactccccatctacccacaggcc
actacatgctaccccaacatagttcagggaggcccctctcaggaggccggcctcagcggc
ggtgaccccgctctgtctcaggtctacgcacccccgccctcctacccaccccctggtcaa
ggtccaccaacatctgcgggcagactgccacctcttgattttacctctgcccaccacagt
tcagagtaccccgaacatccccaactgagaatataccagggccctcagctcgacggggcg
gacactctgatatccagtaacacggaggacgttttggctcctttgacctctgacccccag
tctctgagcgtgtctgtgtcatcagggggcggagcaggaagtggaagtgatgaggaaggt
tctagtaaggcccaaccgaaacgcctccatgtctccaacatcccgtttcgcttccgagac
ccggacctccgccagatgtttgggcaatttgggaagatcctcgatgtagaaataatcttc
aatgagaggggttccaagggctttggatttgtcacttttgagagcgcgagtgaggctgac
cgagcaagagaaaagctgaatgggacgattgtggaggggaggaagattgaggttaataat
gccactgcaagagtcgttaccaaaaagccccagacacctctagtgaatggtgaaattgca
agttctggatggaagatcaaccccgtcatgggggcgatgtatgcgcctgaactctacaca
gttgccagtttcccgtatcccgtagcaactcccaccttggcctaccggggctctgcgctg
cgcggccgaggccgagccgtctacaacacgattcgctctgctgcggccgcgcctgctgct
gtgcccgcctacccccagatggtgtatcaggatggactgtatggaccagaagtttttggt
ggctatcctgcagcttatagagtggctcaatcagcatctgctgccaccgcaacctacagt
gacggatacggacgtatttacacggcagctgcggatccctatcaccactcggttggacca
acggcgacatatggagttggtacaatggccagcttgtacagaggaggatacaaccgcttc
accccgtactga
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