Cyclopterus lumpus (lumpfish): 117746098
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Entry
117746098 CDS
T09199
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117746098
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117746098
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
Prok-RING_4
zf-RING_10
Gp58
UvrD-helicase
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
117746098
NCBI-ProteinID:
XP_034410830
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Position
17:complement(21020713..21022929)
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AA seq
586 aa
AA seq
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MLFGPEVKVSSEEVKLRHSLLPRGEMELKGVQLDQETFSCSICLDLLKDPVTIPCGHSYC
MNCIKAHWDEEDGKKLLSCPQCRQTFTPRPVLLKNTMLADLVEQLKKTGLQAAPADHCYA
GPEDVACDVCTGRRLKAFKSCLVCLVSYCEKHLQPHYDVPPLKKHQLVDPSNQLQENICS
RHNEVMKIFCRTDQQCICYLCSLDEHKGHDTVSAAAERTERQRELEGSRLNIQQRIQDRE
KDLKLLHQEVEAINLSADKTVEDSEKIFTELIRLMENRSSDVKQQVRSQQRTEVSRVKEL
QEKLEQEITELKRNDAELKLLSHTEDLNQLLHHYPSLSPLSESTDSSSINIRPLRYFEDV
TAAVSGLRDELQDVLREKWTNVSLMLTEVDVLLSHSQAEPTTRAGFLRCSCDITLDPNTA
DTLLLLSDGNRKATLMMEHQSYSSHPDRFTSYSQVLSRESLTGRCYLEVEWRGGEGVIVA
VSHKNIMRTGSLNECVFGYNNKSWALDCNNNSFIFLHNKVKTPVSGPRSSRLGVYLDHRA
GILSFYSVSETMTLLHRVQTTFTQPLYAGLGFYYSSGDTAEFCKLK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcggaccagaagtcaaagtctcttctgaggaagtgaaactcagacactcgttg
ttaccgagaggtgaaatggagctcaaaggagttcagctggaccaggagaccttctcttgt
tccatctgtctggatctcctgaaggatccggtgactattccctgtggacacagctactgc
atgaactgtattaaagcccactgggatgaagaggacgggaagaagctcctcagctgccct
cagtgtaggcagaccttcacaccgaggcctgtcctgctgaagaacaccatgttagcagat
ttagtggagcagctgaagaagactggactccaagctgctcctgctgatcactgctatgct
ggacctgaagatgtggcctgtgatgtctgcactgggaggagactgaaggccttcaagtcc
tgtctggtgtgtctggtttcttactgtgagaaacaccttcagcctcattatgatgtacct
ccattaaagaaacaccagctggtggacccctccaaccagctccaggagaacatctgctct
cgtcacaatgaggtgatgaagatcttctgccgtactgatcagcagtgtatctgctacctc
tgctctctggatgaacataaaggccacgacaccgtctcagctgcagcagaaaggaccgag
aggcagagagagctggaggggagtcgactaaacatccagcagagaatccaggacagagag
aaagacctgaagctgctccatcaggaggtggaggccatcaacctctctgctgataaaaca
gtggaggacagtgagaagatcttcactgagctgatccgtctcatggagaacagaagctct
gatgtgaagcagcaggtcagatcccagcagagaactgaagtgagtcgagtcaaagagctt
caggagaagctggagcaggagatcactgagctgaagaggaacgacgctgagctgaagctg
ctctcacacacagaggatctcaaccagcttctccaccactacccctcactgtcaccactt
agtgagtctacagactcatccagcatcaacatccgtcctctgagatactttgaggacgtg
acggcggctgtttcaggacttagagatgaactacaggacgtcctgagagagaagtggaca
aacgtctcactgatgttgactgaagtggatgttttactctctcattcacaagcagagccc
acgaccagagctggattcttaagatgttcatgtgacatcactctggatccaaacacagca
gacacactgctgttattatctgatgggaacagaaaagcaacattaatgatggaacatcag
tcttattctagtcacccagacaggttcactagttattctcaggtcctgagtagagagagt
ctgactggacgttgttaccttgaggtggagtggagaggaggagaaggagttattgtagca
gtctcacacaagaacatcatgagaacagggagcttgaatgaatgtgtgtttggatacaat
aacaaatcttgggctttagattgtaacaataacagttttatatttcttcacaacaaagtc
aaaacccccgtctctggtccccggtcctccagactaggagtgtacctggatcacagagca
ggtattctgtccttctacagcgtctctgaaaccatgactctcctccacagagtccagacc
acattcactcagcctctctatgctggacttgggttttattattcatctggagacactgct
gagttctgtaaactcaaatag
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