Cyclopterus lumpus (lumpfish): 117746099
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Entry
117746099 CDS
T09199
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117746099
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117746099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_3
zf-C3HC4
zf-RING_2
zf-C3HC4_2
U-box
zf-RING_6
Gp58
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
117746099
NCBI-ProteinID:
XP_034410831
LinkDB
All DBs
Position
17:21012340..21016543
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AA seq
561 aa
AA seq
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MANKRIKLDQETFTCCICLDLLRDPLTIPCGHNYCMNCIKDHWNKEDEKNLYSCPLCRQT
FTPRPVLLKNTMLAVLVEQLKKTGLQAAPADHCYAGPEDVACDVCTGRRLKAFKSCLVCL
VSYCEKHLQPHYDAHPFKKHQLVDPSNRLQENICSHHNEVMKIFCRTDQQCICYLCLMDE
HKGHDTVSAAAERTERQRELEGSRLNIQQRIQDREKDLKLLHQEVEAINLSADKTVEDSE
KIFTELIRLMAKRSSRVKQQVRSQQRTEVSRVKELQEKLEQEITELKRNDAELKLLSHTE
DLNQLLLNYPSLSPLSESTDSSSIIIRPLRYFEDVTAAVSGLRDELQDVLREKWTNVSLK
VTEVDALLSQPEPKTRAGFLKYSCDVTLDPNTATTWLSLSDGNRKAKVMREEQSYSSHPD
RFSRCDQVLSRESLTGRCYWEVKWRGGGVDVAVAYKSISRKGNGDECVFGYNNKSWALRC
NKNSCNFHYIFWYNNINTPVSGPRSSRLGVYLDHRAGILSFYSVSGTMTLLHRVQTTFTQ
PLYAGLRFYYPGDTAEFCKLK
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataaaagaattaagctggaccaggagaccttcacttgttgcatctgtctggat
ctcctgagggatccgttgactattccctgtggacacaactactgcatgaactgtattaaa
gaccactggaataaagaggacgagaagaatctctacagctgccctctgtgtaggcagacc
ttcacaccaaggcctgtcctgctgaagaacaccatgttggcagttttagtggagcagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggaggagactgaaggccttcaagtcctgtctggtgtgtctg
gtttcttactgtgagaaacaccttcagcctcattatgatgcacatccattcaagaaacac
cagctggtggacccctccaacagactccaggagaacatctgctctcatcataatgaggtg
atgaagatcttctgtcgtactgatcagcagtgtatctgctacctctgcttaatggatgaa
cataaaggccacgacaccgtctcagctgcagcagaaaggaccgagaggcagagagagctg
gaggggagtcgactaaacatccagcagagaatccaggacagagagaaagacctgaagctg
ctccatcaggaggtggaggccatcaacctctctgctgataaaacagtggaggacagtgag
aagatcttcactgagctgatccgtctcatggcgaaaagaagctctcgtgtgaagcagcag
gtcagatcccagcagagaactgaagtgagtcgagtcaaagagcttcaggagaaactggag
caggagatcactgagctgaagaggaacgacgctgagctgaagctgctctcacacacagag
gatctcaaccagcttctactcaactacccctcactgtcaccacttagtgagtctacagac
tcatccagtatcatcatccgtcctctgagatactttgaggacgtgacggcggctgtttca
ggactcagagatgaactacaggacgtcctgagagagaagtggacaaacgtctcactgaag
gtgactgaagtggatgctttactgtctcaaccagagcccaagaccagagctggattctta
aagtattcatgtgatgtcacactggatcccaacacagcaaccacatggctgtcattatct
gatgggaacagaaaagcaaaagtaatgagagaagaacagtcttattctagtcacccagac
cgattcagtagatgtgatcaggtcctgagtagagagagtctgactggacgttgttactgg
gaggtgaagtggagaggaggaggagttgatgtagcagttgcgtacaagagtatcagcaga
aaagggaacggggatgaatgtgtgtttggatacaataacaaatcttgggcattaagatgt
aacaaaaacagttgtaactttcattatatcttttggtacaacaatatcaacactcccgtc
tctggtccccggtcctccagactaggagtgtacctggatcacagagcaggtattctgtcc
ttctacagcgtctctggaaccatgactctcctccacagagtccagaccacattcactcag
cctctctatgctggacttaggttttattatcctggagacactgctgagttctgtaaactc
aaatag
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integrated database retrieval system
