Cyclopterus lumpus (lumpfish): 117746119
Help
Entry
117746119 CDS
T09199
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117746119
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117746119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
U-box
zf-RING_10
Prok-RING_4
zf-RING_5
FapA
Gp58
Motif
Other DBs
NCBI-GeneID:
117746119
NCBI-ProteinID:
XP_034410880
LinkDB
All DBs
Position
17:19236761..19238431
Genome browser
AA seq
556 aa
AA seq
DB search
MGPKRIKLDKESFSCLLCLDLLKDPMTIPCGHNYCMSCIKAHWDKEDEKKLHSCPQCRQT
FTPRPVLVKNTMLADLVEKLKKTGLQAAPADHCYAGPEDVACDVCTGRRLKAFKSCLVCL
ASYCENHLQRHYDVPPLKKHQLVDPSNKLQENICSLHDEVMKIFCRTDQQCICYLCLMDE
HKGHDTVSAAAAKTERQRELEGSRLNIQQRIQDREKDVKLLHQEVEAINLSADKTVEDSE
KIFTELIRLMARRSSRVKQQVRSQQRTEVSRVKELQEKLEQEITELKRNDAELQKLSDTE
DLNQFLHNYSSLPPLSESTDSSSINIHPLSYFEDVTAAVSEVRDKLLDVLREKWTNVLLM
PTEVDVLPSEPKTRAGFLKYSRELTLDPNTAHRQLLLSDGNRKATLMSEQQSYSIHPDRF
SECLQVLSRESLTGRCYWEVEWRGEGVIVAVAYKNISRKGAGEECIFGINNKSWALTCVK
NGYILFHNKVQTPVSGPQSSRIGVYLDHNAGILSFYSVSETMTLLHRVQTTFTRPLYAGL
WLLYSSGDTVELCKRQ
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgggtccaaaaagaattaagctggacaaggaaagcttctcttgtttgctgtgtctggat
ctactgaaggatccgatgactattccctgtggacacaactactgcatgagctgtattaaa
gcccactgggataaagaggacgagaagaaactccacagctgccctcagtgtaggcagacc
ttcacaccgaggcctgtcctggtgaaaaacaccatgttagcagatttagtggagaagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggaggagactgaaagccttcaagtcctgtctggtgtgtctg
gcttcttactgtgagaaccaccttcagcgtcattatgatgtacctccattaaagaaacac
cagctggtggacccctccaacaagctccaggagaacatctgctctcttcacgatgaggtg
atgaagattttctgccgtactgatcagcagtgtatctgttatctctgcttaatggatgaa
cacaaaggccatgacacagtctcagctgcagcagcaaagaccgagaggcagagagagctg
gaggggagtcgactaaacatccagcagagaatccaggacagagagaaagatgtgaagctg
ctccatcaggaggtggaggccatcaatctctctgctgataaaacagtggaggacagtgag
aagatcttcactgagctgatccgtctcatggcgagaagaagctctcgtgtgaagcagcag
gtcagatcccaacagagaactgaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatcactgagctgaagaggaacgacgctgagctgcagaagctctcagacacagag
gatctcaaccagtttctccacaactactcttcactgccaccactcagtgagtctacagac
tcatccagcatcaacatccatcctctgagctactttgaggacgtgacagcggctgtttca
gaagtcagagataaactactggacgtcctgagagagaaatggacaaacgtcttactgatg
ccgactgaagtggatgttttaccgtcagagcccaagaccagagctggattcttaaagtat
tcacgggaactcacactggatccaaacacagcacacagacagctgttattatctgatggg
aacagaaaagctacattaatgagtgaacaacagtcttattctattcacccagacagattc
agtgaatgcttacaggtcctgagtagagagagtctgactggacgttgttactgggaggtg
gagtggagaggagaaggagttattgtagcagtcgcatacaagaatatcagcagaaaaggg
gccggagaagaatgcatatttggaataaataacaaatcttgggcattaacatgtgtcaaa
aacggttatatcctttttcacaacaaagtccaaactcccgtctctggtcctcagtcctcc
agaataggagtgtacctggatcacaatgcaggtattctgtccttctacagcgtctctgaa
accatgactctcctccacagagtccagaccacattcactcggcctctctatgctggactt
tggcttctttattcctctggagacactgttgagttgtgtaaacgacaatag
DBGET
integrated database retrieval system
