Cyclopterus lumpus (lumpfish): 117746817
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Entry
117746817 CDS
T09199
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117746817
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117746817
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_6
Gp58
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
117746817
NCBI-ProteinID:
XP_034412018
LinkDB
All DBs
Position
17:21003438..21005133
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AA seq
557 aa
AA seq
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MANKRIKLDQETFSCSICLDFLKDPVTIPCGHSYCMNCIKHHWDEENGKKLHSCPQCRQT
FTPRPVLLKNTMLADLVEQLKKTGLQAAPADHCYAGPEDVACDVCTRKRLKAIKSCLVCL
VSYCEKHLQPHFKSYAFENHQLVDPSNQLQENICSRHDEVMKIFCRTDQQCICYLCLMDE
HKGHDTVSSEAERTERQRELEGSRLNIQQRIQDREKDLKLLHQEVEAINLSADKTVEDSE
KIFTELIRLMAKRSSRVKQQVRSQQRTEVSRVKELQEKLEQEITELKRNDAELKLLSHTE
DLNQLLLNYPSLSPLSESTDSSSIIIRPLRYFEDVTAAVSGLRDELQDVLREKWTNVSLK
VTEVDALLSQPEPKTRAGFLKYSCDVTLDPNTATTWLSLSDENRKAKVMREEQSYSSHPD
RFSGCDQVLSRESLTGRCYWEVKWRGGGVDVAVAYKSISRKGNGDECVFGYNNKSWALRC
NKNSCNFQYNKVQTPVSGPRSSRLGVYLDHRAGILSFYSVSETMTLLHRVQTTFTQPLYA
GLHPFSYGDTAELCNLK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataaaagaattaagctggaccaggagaccttctcttgttccatctgtctggat
ttcctgaaggatccggtgactattccctgtggacacagctactgcatgaactgtattaaa
caccactgggatgaagagaatgggaagaagctccacagctgccctcagtgtaggcagacc
ttcacaccgaggcctgtcctgctgaagaacaccatgttagcagatttagtggagcagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactaggaagagactaaaagccatcaagtcttgtctggtgtgtctg
gtttcttactgtgagaaacaccttcagcctcattttaaatcttatgcatttgaaaatcac
cagctggtggacccctccaaccagctccaggagaacatctgctctcgtcatgacgaggtg
atgaagatcttctgtcgtactgatcagcagtgtatctgctacctctgcttaatggatgaa
cataaaggccacgacaccgtctcatctgaagcagaaaggaccgagaggcagagagaactg
gaggggagtcgactaaacatccagcagagaatccaggacagagagaaagacctgaagctg
ctccatcaggaggtggaggccatcaacctctctgctgataaaacagtggaggacagtgag
aagatcttcactgagctgatccgtctcatggcgaaaagaagctctcgtgtgaagcagcag
gtcagatcccagcagagaactgaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatcactgagctgaagcggaacgacgctgagctgaagctgctctcacacacagag
gatctcaaccagcttctactcaactacccctcactgtcaccacttagtgagtctacagac
tcatccagcatcatcatccgtcctctgagatactttgaggacgtgacggcggctgtttca
ggactcagagatgaactacaggacgtcctgagagagaagtggacaaacgtctcactgaag
gtgactgaagtggatgctttactgtctcaaccagagcccaagaccagagctggattctta
aagtattcatgtgatgtcacactggatccaaacacagcaaccacatggctgtcattatct
gatgagaacagaaaagcaaaagtaatgagagaagaacagtcttattctagtcacccagac
cgattcagtggatgtgatcaggtcctgagtagagagagtctgactggacgttgttactgg
gaggtgaagtggagaggaggaggagttgatgtagcagttgcgtacaagagtatcagcaga
aaagggaacggggatgaatgtgtgtttggatacaataacaaatcttgggcattaagatgt
aacaaaaacagttgtaactttcagtacaacaaagtccaaacccctgtctctggtcctcgg
tcctccagactaggagtgtacctggatcacagagcaggtattctgtccttctacagcgtc
tctgaaaccatgactctcctccacagagtccagaccacattcactcagcctctctatgct
ggacttcatcctttcagttatggagacactgctgagttgtgtaatctgaaatag
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