Cyclopterus lumpus (lumpfish): 117747086
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Entry
117747086 CDS
T09199
Name
(RefSeq) WD repeat-containing protein 78-like isoform X1
KO
K24723
dynein axonemal intermediate chain 4
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117747086
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
clum03037
]
117747086
04812 Cytoskeleton proteins [BR:
clum04812
]
117747086
Cilium and associated proteins [BR:
clum03037
]
Motile cilia and associated proteins
Dynein arm
117747086
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
117747086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Rax2
WD40_2
Motif
Other DBs
NCBI-GeneID:
117747086
NCBI-ProteinID:
XP_034412380
Ensembl:
ENSCLMG00005019187
LinkDB
All DBs
Position
17:2402936..2422002
Genome browser
AA seq
775 aa
AA seq
DB search
MSDIAKEERKKRRTLVLRPSSRTINISVSGIQSTRDTNGVIGCPSRKSFSLGGGSKVLEK
SALQTPRQVVRVFDEEDNDVTPQPLYQADPAAAQSKASRLFLDEISAGSASDQTTATGSF
TMPFSRSIFGSSRISSQSTIESVNEEIEDTFPKRDLPINFPEVQRKRDIVKEHVTEDMLK
EVTDISISETDSISLLDIPSTFVSVDADDAEATMERNNQYAELCRNRMGNDKYVDQSVQT
LNGAAKNKQVQSDSIMMVDSATTVTTWDMYDSLISPEQCEELCSQELRRADCPEVGVDTS
RGAERSVSVGSTASSAASSLKEVEAFGSGLNAESDLQLIMLSERFHHSLLVMERSILGNT
FQPKLAAYRQLPVTHEPDSLVQPGMVEQREEDTHSPPSPAVERLWTFSCELSRGRSVHTM
AWNKKNPDLLAVGYGEFGFSNQKPGLVCCWSLKNPTWPERAIQCDSAVTSLDFSSNNPSQ
LAVGMQDGSIAIYNVKNQESESCVLSSSECPNRHLDPVWQLRWTQQELSPTGEEEIESLF
SVAADGRISKWFICRSGLDCIDLMKLKKIQTTKKKVGGTQTESVLSALTPGLCFDFHPTD
SSVYLVGTWEGLVHKCSCSNNQQFLETYRKHFCPVNCITWSPLSPDVFLSCSSDWTIQLW
KQDRHHPMLGFSSTQTAVCDIKWSPKWATVFGAVNEGQLAIWDLNSSLLEPIIVQPAAAG
VKMKSLLFATQTDCVLVGDSDGQVAVYQLKNLSVGESSQVDILEGIIRSAAPKQL
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacattgcaaaagaagaacgaaagaagagacgtactctggttctaaggccctct
tctcgaacaataaatatttcagtatcaggcatacaaagtacaagagacacaaacggtgtc
atcggttgcccaagcagaaaaagtttcagcctgggtggtgggagcaaagtcctggagaag
agcgccctccaaactcccagacaagttgttcgggtgtttgatgaagaagacaatgacgtc
actcctcagccactgtaccaggcagatccagcagcggcacagtccaaagccagccggttg
tttctggatgagatctctgctggatcagcatcagatcagacaacagccaccgggagcttc
acaatgcctttctccaggtcaatatttggaagcagcagaatatccagccagtctaccata
gagtcggtgaatgaggagattgaggatacatttcccaaacgggacctgcccatcaacttt
ccagaggtgcagcggaaaagagacatagtgaaagaacatgtgacagaggacatgttgaaa
gaggtcacagatatctccatctctgagacagacagcatttcactgctggacatacctagc
acttttgtgtcagtggatgctgatgatgcagaagctaccatggagagaaacaatcagtat
gctgagctgtgcagaaacagaatgggcaatgataagtatgtggatcaatcggtgcagaca
ttgaatggagcagctaaaaacaaacaggtccagagcgacagcataatgatggtggactca
gccaccactgttaccacctgggacatgtatgactctctgatcagccccgagcagtgtgag
gagctgtgcagccaggaactaaggagggctgactgtccggaggtgggagtggacaccagc
aggggtgcagagaggagcgtgtcagtgggcagcacagccagttcagctgctagctcattg
aaagaagtggaagcatttgggagcggtctaaatgctgagtcagacctgcagctgatcatg
ttgtctgagagattccatcacagcttgctagtaatggagaggagcatactgggaaacact
ttccaacccaagctggctgcttacagacagctgcctgtaacccacgaaccagacagtctg
gtgcagcctgggatggtggagcagagggaggaggatacccacagccctccatctcctgcc
gtggagcgtctctggactttcagctgtgagctcagcagaggacgcagcgtacacaccatg
gcatggaacaagaagaacccggaccttttggcagtgggctatggagagtttggcttcagt
aaccagaaaccaggcctggtgtgctgctggtctctcaaaaatccaacgtggcctgagcgg
gccatccagtgtgacagcgctgtgacttccctagatttctcatccaataaccccagtcag
ctggctgtgggcatgcaagacggcagcattgctatctacaatgtgaagaatcaagaaagc
gagtcatgtgtcctcagcagtagtgaatgtcccaacagacacttggatccagtgtggcag
ctcagatggacccagcaagagttgagcccgacaggagaggaggagatagagtccctcttt
tctgtggctgcagacggccggatcagcaagtggtttatctgcaggagtggcctcgactgc
atagacctgatgaagctcaagaagatccagacgaccaagaagaaggttggagggacccag
acagaaagtgttctgtcggctctgactcctggactgtgttttgacttccatccaacagat
tccagcgtctacttggttggcacatgggaagggctcgttcacaagtgctcctgttccaac
aatcagcagtttctggagacttacaggaagcacttttgtcccgtgaactgcatcacatgg
agtccactcagtcctgatgtgttcctgagctgctcgtctgactggaccatccagctgtgg
aagcaggaccgccatcaccccatgttaggcttcagctccacccagacggcagtgtgcgac
atcaagtggtccccgaagtgggccacagtattcggagccgttaatgagggacagctggcg
atatgggacctaaattcaagcctcttggagccaatcattgtgcagcctgctgctgctggt
gtgaagatgaagtcgctgctgtttgccacacagacagactgcgtcctggttggagatagt
gatggacaagtggccgtctaccagctcaagaacctcagtgtgggagagagcagccaggtg
gatattctggagggcatcatccgctctgcggctcccaaacagctttaa
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