Cyclopterus lumpus (lumpfish): 117748537
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Entry
117748537 CDS
T09199
Symbol
jmjd1cb
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117748537 (jmjd1cb)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
117748537 (jmjd1cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
C1_2
FYVE
zf-C5HC2
DUF3069
Motif
Other DBs
NCBI-GeneID:
117748537
NCBI-ProteinID:
XP_034414263
Ensembl:
ENSCLMG00005018598
LinkDB
All DBs
Position
19:complement(2163902..2261348)
Genome browser
AA seq
2905 aa
AA seq
DB search
MAVEARPELVGKRFLCVSGDEPPEIGDIGRWPWRSGVIRAVNHLDSDNPDLTVYVEFDDE
EWEKREWVKVYEDFQLFLLEHQLVWAKRKEGAGGGAGGLLQGTKAKHIQWPALAFKPVVG
KSLLSSVTAVEFLLDRQLDFLSDHSAFQPYQDEVDSQNPVLRDNHQLHEEVRGWLKDQKV
QEIFMQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFSRNMVVMNDQVLEPQNVDPSMI
QMTFLDDVVHSLLKGENIGITSRRRSRSSTNNNSAHMAGGRPSGTTGSTQSHYTRAQANS
PRPIMTSSGPNPKGSQGTLASQQQSQSQQSQQPVSQSHHSPGSSGREQREQRNSRSSRRK
GSDSSVPEEDKDRREEPTGRDSKSKAKQAVNKRRKGEEDEKKAGLKRLKTDMTSDLSESS
DSENPHNKRTAHSSCSSSSSSSSSSSSSSSSSSSEANSENELKSRASDVKQIVVSKKEEE
KEQQPPPMQGTKMNDSSSLIGRLSPWAELQGAEDGKKVVVKETGKMSTKQEEELVAVTQI
TQSPRQQVPQMSEAVQAGSVESSKSIVKVSSQSQTPSLSNPAGTGSRGVIDITDEAQATV
HQESSEAVSALLASQKAESTALSPYLPLNPSPVSSPPVPPSPSPSEGGRRTDTEPQGIMG
GGITAARSLSNKMEFTPSEVIRPVTSMVENVVLVEKEKTVLPHHLHHQQQQQHAQQQHYT
SIHPGIRSPSLSEETRKHPPQQVPPHKMNTILHPELVRSRMSPNPAQLDALKQKPQHPNN
SQSHPYPNTNPADLLKAKPHPGLLDISKPKPNTSPEVSKHKIPRYSDTSPPPLGRLAAKL
ETAESPRSGFKPVPARSESGGVSLSCSTKSPLIIDKNETFTVYRDPALVRSDAENSVSVS
VSSNHVAAYLHPHLHTLHSPSPHSPCLTTASHPHAASHLLAPPHTSSLPHSHLLPPGVLP
SMPPPTASLLGGHPRLDSPSGLGHLALPHQQQFLQGQGPPPPSLLAQAHGGAAGLGLYPI
LWQYPNGTPTSYPPGLNLPPTAKWVHPENPVSVNSEGSLRRNSASPWLHQAAGSAGDAMG
LLSHVPVRPASADPHRPPIKISVHASPPLSKAGMNAHKEDMDKKGFVDPIRTLTLAQLKQ
EQTDRSRTPTGKDVHLHRLYLDPHCKARMANAQDAVQAADRASKYKEENRQILKESIEVA
PFTAKIQRSGDPGMDRDRERCRDPAFPVRLLALACPSPKAGHIHPHVIQSEKSNYFTTLS
NSVVNEPPRLYPSKELSSYYEKVSGGAPGVVTSVGATVPSQGALSLGSYSSKASLSKPPP
LIKHQPEGGEGLAGKITEQLSQQVTLVQQQQQLHTGGMDRIERRSPAISPSSSTSSSTAH
NHHHHHHHQQHQQQQQQQQQQQQHHQLRAMPSLHRAPVFHPPTQHALDRKEAAERERERE
KERERERERERERERERERAGYGGRLSPPTLTPIQPVSLAVAGSKTSAEQQKPPTLLPEL
RDVKGHGNAATITSVASVFGGEIMTSSVDAWRQGEMIQDRGGMSRVKPQSAMASVIVRPS
SSIKYDSLVGFNKSGAMITKDLPQGRFYPAKLQGEALRLGESVREVVAGRVIQPNSNFDD
SCIQYKHASMRAMQGTMAAGITNSVCRTAISATSAFGIQSISGTAIPELGYSISAHKTGI
CGRVLNHSGPGEYQEGLGSRTTSPGGSLPPPSPAGTPQPSQSLTPTPSSISGCSQPYSSS
FVHLKKHKAALAAAQSRSNFSTVPTSIAAGNCFLPVDSVDKTPVRNSPPPPSSSQASSSS
VDSSISSSASGTTTTGKSSPVPNGQTSGSASTSSGQPSNYHKLKKAWLTRHSEEDRNTTA
TASFTSIKPEKLPSTSNSTSTATSTSTSNTAAMSEMIKPCTVNLSASTSSEVELSKDCKA
ERERQLEEKVGGAATGGVGEERKAAPSSRRGNKRSYESASESGGDDSDASESKMEGRAKR
QPKPTYKKKQNDMARRKGDNEKDEDDLKPNGIFRSAREKTKLKLASTNGIPRSVLKDWRK
VKKLKQTGESFLQDDSCAEIGPNLQKCRECRVVRSKKGEEPTHSPVFCRFYYFRRLSYSK
NGVLRMDGFSNPDQFDDEALSLWVPGLMEESQLDQTTAKYILSFIGDKFCQMVVTENNAA
TWIKKDAKLAWKRAVRGVREMCDACEATLFNIHWVCQKCGFVVCLDCYKAKERRSSKDKE
LYGWLKCVKGQPHDHKHLMPTQIIPGTVLTELVSSMHSLREKYNIKPNCPCTNKQNLLTK
LPATNGVSQVLQNVLNHSNKLSLVKAEPGSQQNSDQGGTKVETNGGSGGESNPGSDAGSA
PVTPPESQSPLHFLADLAEQKSREEKKENKLVLLGKSVKEDKVGDSLEVLQQCKTTSLVA
NSTEQGSTLRDLLTTTAGKLKLGSTDAGIAFAPVYSTASQMGKGGRTMPNILDDIIASVV
ENKIPASRQSIATKLSIKHEPVTLSNNNSIPATAISEDAKPDRKKLAHVTAAVPEESTNQ
YPDIPHCWLNNRRLLWLKDHRNQNNWRLFRECWRQGQPVLVSGIHKRLNGGLWKADSFNQ
EFADHQGDLLNCKDQVVSNSGIKEFWDGFEDITKRPKSKDGEPMVYRLKDWPSGEEFMAL
MPSRYDDLMKNLPLPEYSDPEGNLNLASHLPSFFVRPDLGPRLCCAYGVAASQDQDFGTA
NLHVEVSDVVSILVYVGVAKGNGVLSKTGVLKRLEEEELDEGVRRRLKDSSETPGALWHI
YLNKDMDKVREFLHKEQGSDTMVDQDPIREQGSYLSRKQRQRLLDEHGVQGWTVVQFLGD
SVLIPAGAMHQVQNLHSCVQVINDFVSPEHVANSFHLTQELRPSKEEVNYEDKLQVKNIL
YHCVKEAVNSLKRSGSEEDDQEENS
NT seq
8718 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcgaggctcggccggagctggtcgggaaacggttcctctgtgtcagcggggac
gagccgcctgaaatcggtgacatcggccggtggccgtggaggtccggggtcatacgagcc
gtgaaccaccttgacagcgacaaccccgacctgacggtatatgtggagttcgacgacgag
gagtgggagaagagagagtgggtgaaggtctatgaggatttccagctgtttcttttggag
caccagctggtctgggccaagaggaaggagggagcaggaggaggagcaggaggactgctt
cagggaaccaaggccaaacacatacagtggcctgccctggcgtttaagccagtggtgggg
aagagcctgttgtcctcagtaacagccgtggaattcttgttggaccgacagctggacttc
ctgtccgaccactcggccttccaaccgtaccaggatgaggtggacagtcagaacccagtg
ttgagagacaaccatcagctccatgaagaagtgaggggctggctcaaagaccagaaggtg
caggaaatttttatgcaaggtccctattcactgaatggctaccgagtgcgtgtgtacaga
caagactcggccacccagtggttcactggcatcattacacaccacgacctcttcagtcga
aacatggtcgttatgaatgaccaggtgctagaacctcagaacgtggatccctctatgatc
cagatgacctttctggacgacgtggtccactctctgctgaaaggagaaaacatcggcatc
acttccagacggaggtcacgatccagcacgaacaacaactctgcccacatggcgggaggg
agacccagcgggaccactggcagcactcagagtcattacacgcgagcccaagccaacagc
ccccgccccatcatgacctcatcgggccccaacccaaagggttcccaggggacgctggcc
tctcagcagcagagccaatcgcagcaaagccagcagcccgtcagccaatcgcaccactcg
cccggcagcagtgggcgggagcagagggagcagcgcaactctcgctcgtccaggaggaaa
ggatcggacagcagcgttccagaggaggacaaggaccgaagagaggagcccacagggaga
gactccaagtcaaaggccaaacaggcggtgaacaaacgcaggaaaggcgaggaagatgag
aagaaggcaggtctaaagaggctaaagactgacatgacctctgacctgtcggagagcagc
gactcagaaaacccgcacaacaagaggaccgcccactcctcctgctcctcctcctcctca
tcgtcctcgtcctcctcgtcctcttcctcttcctcctcctcggaggccaactctgagaac
gagctaaagtctcgtgccagtgatgtgaaacaaatcgtcgtttccaaaaaggaggaggag
aaggagcagcagccgcccccgatgcagggcaccaaaatgaacgattcctcctctctcatt
ggccgcctgtccccatgggcggagcttcagggagcggaagacggcaagaaggttgtggtc
aaggaaacgggcaaaatgtcaaccaagcaggaagaggagttggtggcggtgacgcagatc
acccagtctccacggcaacaggtgcctcagatgtctgaggcggtccaggccggcagtgtg
gagagcagcaagagcatcgtgaaagtgtcttctcaatctcagacgccatcgctgtccaat
cccgccggcactggcagcagaggcgtgatcgacatcacggatgaggcccaggccactgtg
caccaggagagctccgaggccgtgtcagcactgctcgcctcgcagaaggccgagtccacg
gccctctccccttaccttcccctcaacccctctcccgtttcttcgccgcccgttccgccg
tctccctcgccatcggaaggaggccgcaggacggatactgagccgcaaggcattatggga
ggtggcataacagcagccaggagcttaagcaacaagatggagtttactccctctgaggtc
atcaggcctgtcacatcgatggttgaaaatgtggtgttggtggagaaggagaaaactgtc
cttcctcatcatctccatcatcaacagcagcagcagcacgcacaacaacaacactacaca
tccatccaccccggcatcaggagcccgtctctgtctgaggagacgagaaaacaccctccg
caacaagtgccaccccacaagatgaacacaatcctccaccctgaactagtcagatccaga
atgagccccaacccagctcagctcgacgccctgaaacagaaaccacagcaccccaacaac
tctcagagccatccctaccccaacacaaatccagctgaccttctcaaggctaagccccac
ccgggcctgctggacatctccaaacccaaacccaacacctccccagaggtctccaagcat
aaaataccaaggtactccgatacctccccgcctccattaggccgcttggcggccaaatta
gaaacggcagaatccccgcggtccggtttcaagccggtgccggcgcggtcggagtctggt
ggagtcagtttgagctgcagcaccaagagccctctgatcatcgataagaacgagaccttc
accgtttacagggacccagcgctggtccgctcagacgctgagaactctgtctccgtctcc
gtgtcctccaaccacgtggcagcctatctccatccccacctgcacacccttcactccccc
tcccctcactccccctgcctcaccaccgcgtcccacccccatgccgcctcccacctcctc
gcccctcctcacacctcttccctacctcactcgcacctgttgccccccggggtgctcccg
tccatgcctcctcccacggcgtccctccttgggggccatccccggctcgactcccccagc
gggctgggccacctcgccctgcctcaccaacagcagttcctccagggtcagggcccccct
ccaccctctctactagcccaggctcatggcggggcagcagggctgggtctttaccctatc
ctttggcagtaccccaacggaacgcccacctcttaccccccggggctcaacctgcccccc
acagccaagtgggtccaccctgaaaaccctgtcagcgtgaattccgagggttcgctcagg
aggaactcagccagtccgtggttgcaccaggccgctggcagcgctggtgacgctatgggt
ttgctaagccacgttcccgttcggccggcaagtgccgacccccaccggcccccgatcaag
atcagcgttcacgcgagccctccgctgtcgaaggccggcatgaacgcgcataaagaagac
atggataagaaaggcttcgtggacccgatcaggacgttgacgctggcccagctgaagcag
gagcagacggaccggagtcgaacccccacggggaaagacgtccacctccaccgcctctac
ctagacccacactgcaaggctcgcatggctaatgcacaggatgccgttcaagcagcggac
cgagcgagtaaatacaaagaggagaatcgtcaaatcctgaaagagagcatcgaggtcgct
cccttcaccgccaagatccagcgctccggtgaccctgggatggacagggacagagagagg
tgcagggatccagccttccccgtccggttactggctctcgcctgcccgagccccaaagcc
ggccacatccatccccacgtcatccaatcagaaaagagcaactacttcacaacactgtcc
aacagcgttgtgaacgagcctccgagactctacccctccaaggagctcagctcttactac
gagaaagtgtccggtggagctccaggggtcgtgaccagcgttggggccaccgtgccaagc
cagggagctctgtccctgggcagctacagctccaaagcctccctctccaagccccctccc
ctgatcaagcaccagccggagggaggagagggtttagcagggaaaatcacagagcagctc
agccagcaggtgacactagtccaacagcaacagcagctccacacgggtggtatggacagg
atagaacgccgcagccctgccatttctccttcctcctctacatcttcctccacagcacac
aaccaccaccaccatcaccaccaccaacaacaccagcagcagcaacagcagcagcagcaa
caacaacaacatcaccagctcagggcaatgccatctctccaccgagcgcctgtcttccat
ccacccacacagcacgcactggatcgcaaagaggctgcagagcgagagagggagcgggag
aaggagagggagagggagagggagagagagagggagagagagagagagcgggaaagagcc
ggttacggcggacgcctgtccccaccgaccctcacgcccatccagccagttagcttagcg
gtagccggtagcaaaacatctgcggagcagcagaagccccccaccctcctgccggaactc
agggacgtcaaaggtcatgggaacgccgccaccatcacctccgtggcctcagtcttcggt
ggggagatcatgacttcgtccgtagacgcgtggaggcaaggagagatgattcaagacagg
ggggggatgtcgagggtcaagcctcaatccgcaatggcgtctgtcatcgtgcgtccgtcg
tcatccatcaagtacgacagtcttgttggttttaacaaatctggtgctatgatcactaag
gatctcccccaggggaggttctacccagccaagcttcagggggaggctcttagactaggg
gagagtgtgagagaagttgtagccggcagggtgatccaacccaactcgaacttcgacgac
agttgtatccagtacaaacatgcttctatgcgtgccatgcagggcactatggcagccggg
atcacaaactctgtgtgcaggactgccatttcagccacatcagcttttggcatacagagt
atcagtgggacagccatccccgagctgggctactcaatctcagcccataaaactgggatt
tgcggccgggtgctaaaccactcaggaccgggagagtaccaagaggggttaggctcacgc
accacatctcctggggggtctctgcctccccctagtccagcagggacaccccagcccagt
caaagcctcaccccaacacccagctccatttctggctgcagtcagccttactcctcctcc
tttgtccaccttaagaagcacaaagctgctttggctgcagcccagtccagaagcaacttc
tccaccgtgcccacatccatcgcagccggaaattgcttcctgcctgtggattcagtcgac
aaaactcccgttcgcaactcgccccctccaccctcctccagccaagcctcgtcatcttcg
gtcgacagcagtatcagcagctcggccagcgggaccacaacaacggggaagtccagtccc
gtgcccaacggccagacctcggggtcggcctcgacgagcagcgggcagcccagcaactac
cacaagctgaagaaagcctggttaactcggcactcagaggaggacaggaacacaacggct
actgcgagcttcaccagtattaaaccagagaaactgcccagcaccagcaacagcaccagc
accgccaccagcaccagcacaagtaacaccgcggccatgtcagaaatgatcaaaccctgc
acagtcaatctcagtgcctccacctccagcgaggtggagctgagcaaagactgcaaagca
gagagagagaggcagctggaggagaaggtgggaggagcagccacagggggtgtaggggag
gagagaaaagcagctccctcatcaaggcgagggaacaagcggtcctatgagtccgcttca
gagagcgggggagacgactccgacgccagtgagagcaagatggagggccgagccaagcgt
caacctaaacccacctacaagaagaagcagaacgatatggccaggaggaaaggagacaac
gaaaaggacgaggatgatttgaagcccaatggcatcttccgatcagcccgggagaagacg
aaacttaaacttgccagcaccaatgggatcccccgctccgtcctgaaggactggaggaag
gtgaagaagctgaagcagacgggggagtcgttcctgcaggacgactcatgtgccgaaatc
gggcccaacctgcagaagtgtcgggagtgcagggtggtccgcagcaagaagggagaggag
ccgacgcattcccccgtcttctgccgcttctactatttcagacggctgtcctacagtaaa
aacggagtcctccggatggatggcttttccaatccggaccagttcgacgatgaagccctg
tccctgtgggtgcccgggctgatggaggagagccaattggaccaaaccacagccaagtac
atcctcagcttcataggagacaagttctgtcagatggttgtgaccgagaacaacgcagcc
acctggatcaagaaggatgccaagttggcgtggaagcgagcggtgagaggggtgagggag
atgtgcgacgcctgtgaggcgacgctcttcaacatccactgggtctgtcagaagtgtggc
tttgttgtctgcttggactgctacaaggccaaggagagaaggagctccaaagataaagaa
ctctacggctggctgaagtgtgtgaaaggccaaccccatgaccacaaacacctgatgccc
acacagatcatacctggcacagtgctgacagagttggtgtcttccatgcactctctgaga
gaaaaatacaacatcaaacccaactgtccctgcaccaacaagcagaacctcctcaccaaa
ctaccagccaccaacggagtctcacaggtcctgcagaacgtcctgaatcacagcaacaaa
ctgtctctggtgaaagctgagccgggctctcagcagaactccgaccaaggcggaacaaag
gtggagaccaacgggggaagcggtggggagagcaatccaggcagcgacgcaggaagtgct
cccgtcaccccgcccgagtcccagtcgcctctgcacttcctggcagacctggccgagcaa
aagtccagggaggaaaagaaagaaaacaagttggtgctgctcggtaaatcggtaaaggaa
gacaaggtgggggacagcctggaggtcctgcagcagtgtaaaaccacgtcactggtagcc
aacagtacggagcagggctccacactcagagacctgctcaccaccacagcagggaagctg
aagctgggctccaccgacgcaggaattgcttttgcaccggtctactctactgcgtcacag
atgggaaaaggtgggaggaccatgcccaatatccttgacgacatcattgcttctgtagtt
gagaacaaaatccccgccagtcgccagagcatcgcaaccaaactgtcaattaagcacgag
cccgtcaccctgagcaacaacaacagcatccctgccactgctatcagtgaggatgccaaa
ccagacaggaagaagttggcgcacgtgactgcggcagtgcccgaggaatcgaccaatcag
tatccagatattccccactgctggttaaacaacagacggctactgtggctcaaagatcac
cgcaaccagaacaactggaggctgttcagagagtgctggagacaaggacagcccgtgttg
gtgtcggggatccataagcggctcaacggtggcctgtggaaagctgactccttcaaccag
gagtttgcagaccatcagggagacctcctgaactgtaaagaccaggtggtgtccaactcc
ggcatcaaggagttctgggatggatttgaggacatcaccaagcggccaaagtccaaggat
ggagaaccgatggtctacagactgaaggactggccgtctggggaggagttcatggccctg
atgccctccagatatgatgacttgatgaagaacctgccgctgccagagtactctgatcca
gaaggcaacctcaacctggcctcccacctgccatctttctttgtccggcccgatctgggg
cccagactgtgctgtgcctacggtgtagctgcgtctcaggaccaggacttcgggaccgcc
aacctccacgtggaagtctccgatgtcgtctccattctggtctacgtaggagtggccaaa
ggcaacggagtcctgtccaaaactggagtgctgaagcgtctggaggaggaggagctagac
gagggggtccgaaggaggctcaaggactccagcgagaccccgggggctctgtggcacatc
tacctcaacaaagacatggacaaagtccgagagttcctgcacaaggagcagggatcggac
acgatggtggaccaggacccaatcagagagcagggctcgtacctgagcaggaagcagcgt
cagcggctgctggatgagcacggagtccagggctggactgtggttcagttcctgggggac
tctgtactcataccagcaggggccatgcaccaggtccagaacctccacagctgtgtccag
gtcatcaacgactttgtgtctcccgagcacgtggccaactccttccacctgacccaggag
ctgcggcccagtaaagaggaggtcaactacgaggataaactacaggtgaagaacattctg
taccactgtgtgaaggaggcggtgaactccctgaagaggagcggctctgaggaagacgac
caggaagagaactcatga
DBGET
integrated database retrieval system
