Cyclopterus lumpus (lumpfish): 117749818
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Entry
117749818 CDS
T09199
Symbol
eloca
Name
(RefSeq) elongin C paralog a
KO
K03872
elongin-C
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117749818 (eloca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117749818 (eloca)
03400 DNA repair and recombination proteins [BR:
clum03400
]
117749818 (eloca)
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul2 complex
Adoptor protein
117749818 (eloca)
Cul5 complex
117749818 (eloca)
DNA repair and recombination proteins [BR:
clum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
117749818 (eloca)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Skp1_POZ
ADAMTS_CR_3
Cofilin_ADF
Motif
Other DBs
NCBI-GeneID:
117749818
NCBI-ProteinID:
XP_034416484
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All DBs
Position
20:complement(10042324..10044898)
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AA seq
115 aa
AA seq
DB search
MDGEERTYGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGEDLTIAENET
NEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgaagagagaacctacggtggctgtgaggggccagatgccatgtatgtgaaa
ctgatctcttcagatggtcatgaatttattgtgaaaagagaacatgctttgacatctggg
actatcaaagccatgttaagcggaccaggtgaggatttgacaattgctgaaaatgaaacc
aacgaagtgaacttcagggagattccctctcacgtcctgtccaaggtctgcatgtacttc
acctacaaggtccgctacaccaacagctccacagaaatacctgaattccccatcgctccg
gagatcgccctggagctgctcatggctgcaaactttttggattgctaa
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