KEGG   Cyclopterus lumpus (lumpfish): 117749818
Entry
117749818         CDS       T09199                                 
Symbol
eloca
Name
(RefSeq) elongin C paralog a
  KO
K03872  elongin-C
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117749818 (eloca)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:clum04121]
    117749818 (eloca)
   03400 DNA repair and recombination proteins [BR:clum03400]
    117749818 (eloca)
Ubiquitin system [BR:clum04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul2 complex
    Adoptor protein
     117749818 (eloca)
   Cul5 complex
     117749818 (eloca)
DNA repair and recombination proteins [BR:clum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     117749818 (eloca)
SSDB
Motif
Pfam: Skp1_POZ ADAMTS_CR_3 Cofilin_ADF
Other DBs
NCBI-GeneID: 117749818
NCBI-ProteinID: XP_034416484
LinkDB
Position
20:complement(10042324..10044898)
AA seq 115 aa
MDGEERTYGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGEDLTIAENET
NEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC
NT seq 348 nt   +upstreamnt  +downstreamnt
atggacggtgaagagagaacctacggtggctgtgaggggccagatgccatgtatgtgaaa
ctgatctcttcagatggtcatgaatttattgtgaaaagagaacatgctttgacatctggg
actatcaaagccatgttaagcggaccaggtgaggatttgacaattgctgaaaatgaaacc
aacgaagtgaacttcagggagattccctctcacgtcctgtccaaggtctgcatgtacttc
acctacaaggtccgctacaccaacagctccacagaaatacctgaattccccatcgctccg
gagatcgccctggagctgctcatggctgcaaactttttggattgctaa

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