Colletotrichum lupini: CLUP02_12633
Help
Entry
CLUP02_12633 CDS
T08561
Name
(RefSeq) SNF2 family domain-containing protein
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
clup
Colletotrichum lupini
Pathway
clup03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CLUP02_12633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clup03400
]
CLUP02_12633
DNA repair and recombination proteins [BR:
clup03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
CLUP02_12633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Rad54_N
Helicase_C
ResIII
AAA_22
HDA2-3
Citrate_ly_lig
Motif
Other DBs
NCBI-GeneID:
73346607
NCBI-ProteinID:
XP_049148742
LinkDB
All DBs
Position
6:join(3783124..3783157,3783252..3783480,3783541..3785947)
Genome browser
AA seq
889 aa
AA seq
DB search
MLGVEEEEEAEYGPWCLVHVKACLSGDAGRVALCPKSTPGPPTRNIALILFPPSSSATSL
LLSAKPYPRDCAYTAPAALLHYEPRFTMTVDVTATPIANKENVPSKRWPTPQSVDKLSRP
FKCPGSATRTVATDRPARKKRRVDYKGADGETDADKPYTNADRLALANRDANRFPVFQAK
DKSTVFRKAFSVPLINKNTSAYNPNRPPPTLGLRTGAQFIAKPLHDPSGEFAIVLYDPTI
DDKPKEPEKKEDKKEAEAETKIDAPLVHKSLAEILGIKKKVEGEHPRVPVVIDPRLAKVL
RPHQVEGVKFMYRCVTGMIEEKANGCIMADEMGLGKTLQCITLLWTLLKQSPDAGKSTIQ
KAIVACPSSLVRNWANELVKWLGADAVTPFAIDGKASKEELTRQLRQWAIASGRSVTRPV
IIVSYETLRLNVEELKHTKIGLMLCDEGHRLKNGDSQTFSALNNLNVTRRVILSGTPIQN
DLSEYFSLISFANPDLLGTRLEFRKRFELPILRGRDADALESERKKGDECLSELLGIVNK
FIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITSPDIQALLRGKGSQPLKAINI
LKKLCNHPDLLNISDDLPGSENCFPDDYVPKEARGRDRDIKPWYSGKMQVLDRMLARIRQ
DTNDKIVLISNYTQTLDLFEKLCRNRAYGCLRLDGTMNVNKRQKLVDKFNNPDGDEFVFL
LSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEK
IFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQYRPGTKSDTHDTFKCKRCKPDGRQ
YMKSPAMLYGDTSTWNHFVNEGLKPIQDLLLRQECGEPEVSAVFQYISH
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgttgggggtggaggaggaggaggaagctgagtatgggccctggtgcctggtgcacgtg
aaagcgtgtttgagtggcgacgcgggtcgagtcgcgctttgccccaaatcaacaccgggc
cctccgaccaggaacattgctcttattctcttccctccatcttcgtccgccacttctctg
ctgctctctgcgaagccttacccccgggattgcgcatacactgcacctgcagcattgcta
cactacgaaccgcggttcacaatgactgtcgacgtcaccgccaccccgatcgcgaacaag
gagaacgtgccgtctaagcgatggccaactccccagtcggtcgataagttgtcaagaccg
ttcaaatgccctggttcagcaacgagaacagtcgcaaccgacagaccggcgcgcaagaag
agaagggtcgattacaagggcgctgatggcgagactgacgccgacaagccctacacaaat
gccgatcgcctggctttagcgaaccgagatgcaaacagattccccgttttccaggccaag
gacaagtcaacagtatttcgcaaggcattctcggtgcctctgatcaacaagaataccagt
gcctataacccgaatcgacctccgccaacccttggtctgcgcacgggagcacaattcatt
gccaagccgttgcacgaccccagtggcgagtttgccattgtgctatacgatccgactatc
gatgataagcccaaagagcccgagaagaaggaagacaagaaggaagccgaggccgagact
aagattgacgcgcctctcgtccacaagagtctggcggagattctcggaatcaagaagaag
gtcgaaggggagcacccccgagttcctgttgtaatcgacccacggttggccaaggttctc
agaccacatcaggtcgagggtgtcaagttcatgtacagatgcgtcactggcatgattgag
gagaaggccaatggctgcatcatggccgacgagatgggtctcggaaagaccttgcaatgc
atcactttactttggacccttctgaagcaatccccggatgctggaaagagcacaatccag
aaagcaattgttgcgtgcccttccagtttggtgcgcaactgggccaacgaattggtcaag
tggctcggtgccgatgccgtcacaccttttgcaattgacggaaaggcgtccaaggaagag
ctcacgcgacagctgcgacagtgggctattgcgagcggcagatcagtcacaagaccagtc
atcatcgtatcttacgagactcttcggctgaacgttgaggagctgaagcacaccaagatc
ggccttatgctttgcgatgaaggccatcgtctcaagaacggagacagtcagactttcagc
gcactcaacaatttgaatgtcacaagacgagtcattctgtccggaacgcccattcagaac
gacttgtccgagtacttctccttgatcagcttcgctaacccggatctcctgggtactcgg
ctcgagttccgcaagagattcgagcttccgattcttcgcgggcgtgacgccgacgccctc
gagtctgaaaggaagaagggcgacgagtgtctgtccgagctcttgggcattgtcaataag
ttcatcattcgccgcaccaacgacatcttgtccaagtacttgcccgtcaagtacgagcat
gtcgtgttctgcaatcttgcaccctttcagctcgacctttacaactacttcatcaccagt
ccggacattcaggcgcttctccgtggcaagggcagtcaacccctcaaagccatcaacatc
ctcaagaagctctgcaaccacccggatctgctcaacatttcggacgatttgcctggttcg
gagaactgcttccccgatgattatgtcccgaaagaggcgcgtggcagagatagagatatt
aagccttggtactcaggcaagatgcaagtcctcgaccgcatgctcgcccgtatccgccag
gacacaaacgacaagattgtactcatcagcaattacacacagacgcttgacctgttcgag
aagctctgccgtaatcgtgcttacggctgcctgcgccttgatggcaccatgaacgtcaac
aagcgccaaaagctcgttgacaagttcaacaacccggacggagatgagtttgtgttccta
ctcagttccaaggctggtggctgcggtctcaacctcatcggcgccaaccgcttggtcctc
ttcgaccccgactggaaccccgccgcagaccaacaggccctcgctcgagtctggcgtgac
ggtcagaagaaggactgcttcgtctaccgcttcattgccacgggaaccattgaggaaaag
attttccagcgccagtcccacaagcaatcgctgtccagttgcgtcgtcgactccgccgag
gatgttgagcggcacttttcgctcgacagtctgcgcgagctgttccagtaccggcccggc
accaaatccgacacgcacgacacgtttaagtgtaagcggtgcaagcccgatggcaggcag
tatatgaagtcgcctgccatgctgtacggcgacacgagcacgtggaaccactttgtcaac
gaggggttgaagccgattcaggacctgttgctgaggcaggagtgtggggagccggaagtg
tctgccgtgttccagtatatttcgcattag
DBGET
integrated database retrieval system
