Clavispora lusitaniae CBS 6936: A9F13_01g09152
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Entry
A9F13_01g09152 CDS
T05147
Name
(GenBank) putative tFIIH/NER complex subunit
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
clus
Clavispora lusitaniae CBS 6936
Pathway
clus03022
Basal transcription factors
clus03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
A9F13_01g09152
09124 Replication and repair
03420 Nucleotide excision repair
A9F13_01g09152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clus03021
]
A9F13_01g09152
03400 DNA repair and recombination proteins [BR:
clus03400
]
A9F13_01g09152
Transcription machinery [BR:
clus03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
A9F13_01g09152
DNA repair and recombination proteins [BR:
clus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
A9F13_01g09152
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
zf-HIT
VWA
FYDLN_acid
Motif
Other DBs
NCBI-ProteinID:
OVF11403
UniProt:
A0AA91T4E2
LinkDB
All DBs
AA seq
460 aa
AA seq
DB search
MDSDDDFSAHSAESDVPLSPDSDGMARRTRARASEPKQAAYAWEDEYQRTWDIVKDDTSR
PVELLVQQMVDARKAKLSRNAATPFQRGIIRTVVVVVDASRAMLEKDLRPTRFGATVAHL
QDFVAEFFDQNPIAQMAVVMMRNGVASVVSELSGSAQLHIERLRALRARQHTLEPKGDPS
LQNALELARALLTAGGGPTSRSSREIVVVFGALFTSDPGDIHQTIDSLVRDEIRVRVIGL
AAQVAICRELVARTNAGECAGYGVIVGDAHFRELLMACVEPLAVARRAAETATGVPVLRM
GFPSRAPAAPGMPVLCACHPQGGGADTGYWCPQCRSRVCSLPCVCPVCGLMLILSTHLAR
THHHLVPPPDYETKEETKETKETNDSNNDNSNSNNDSSNGSNNDSSGNSSERCFGCLAQG
DGALGARYACAACGQRFCIDCDVFVHEVLHNCPGCEARAA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggactccgacgacgacttttctgcacacctggcggagctggacgtgccgctttcgccc
gactcggacggaatggcccggcgcacacgcgcacgcgcctccgagcccaagcaggccgcc
tacgcctgggaagacgagtaccagcgcacatgggacattgtcaaggacgacacgctgaga
ccggtggagctcctcgtccagcagatggtggacgcacgcaaggccaagctcagccgcaac
gccgccacgccgttccagcgcggcatcatccgcacggtggtggtggtggtggatgcgtcg
cgggccatgctcgagaaggacttgcggcccacgcgctttggcgccaccgtggcgcacctc
caggactttgtggcggagtttttcgaccagaacccgatcgcgcagatggccgtggtcatg
atgcgcaacggcgtggcgtcggtggtgagcgagctcagcggcctggcccagctccacatc
gagcgcctccgggcgctccgcgcgcgccagcacacgctcgagcccaagggcgacccgctg
ttgcagaacgcgctcgagttggcgcgggcgcttctcacggccggcggcggaccaacgtcc
cgcagctcgcgcgagatcgtggtggtgtttggcgctcttttcacgctggacccgggcgac
atccaccagaccatcgactcgctagtgcgcgacgagatccgcgtgcgggtgatagggctt
gcggcgcaggtggccatctgccgcgagcttgtggctcgcaccaacgccggcgagtgtgcg
ggctacggcgtgattgtgggcgacgcgcacttccgcgagcttctcatggcgtgcgtggag
ccgcttgcggtggcgcggcgggcggccgagacggccacgggcgtgccggtgcttcgaatg
ggcttcccgctgcgggcgccggcggcgccgggcatgccggtgttgtgtgcgtgccatccg
cagggcggcggcgccgacacgggctactggtgcccgcagtgccgcagccgcgtgtgtctg
cttccgtgtgtgtgtcccgtgtgcgggctcatgttgatcttgctgacgcacttggcccgc
acgcaccaccacttggtgccgccgccggactacgagacaaaggaggagacaaaggagaca
aaggagacaaacgacagcaacaacgacaacagcaacagcaacaacgacagcagcaacggc
agcaacaacgattccagcgggaactcctccgagcgctgcttcgggtgtcttgcccagggc
gacggggcgctcggcgcccgctacgcctgcgcggcctgtggccagcgcttctgcatcgac
tgcgacgtgtttgtgcacgaggtgctccacaactgtccgggctgcgaggcccgtgcggca
tga
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