Clavispora lusitaniae CBS 6936: A9F13_09g01045
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Entry
A9F13_09g01045 CDS
T05147
Name
(GenBank) putative DNA ligase
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
clus
Clavispora lusitaniae CBS 6936
Pathway
clus03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
A9F13_09g01045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clus03400
]
A9F13_09g01045
Enzymes [BR:
clus01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
A9F13_09g01045
DNA repair and recombination proteins [BR:
clus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
A9F13_09g01045
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
BRCT_2
RNA_ligase
DNA_ligase_A_C
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
OVF08177
UniProt:
A0AA91T1P1
LinkDB
All DBs
AA seq
961 aa
AA seq
DB search
MSVSTSFLDNVKEPENFNPEPAPFDLIISELVLKLESTNHENMAPFGTVSAKKVNIIEEF
IKLWRTHFGVNISPALSLIFPNKDSRKYFIKDVALTRLVIKLLRLQQGSTDYSIIKNWKK
SYQQKIQLTGSNEHRSTGDLPLIIARIMSRRRDPNSVVETSVTVTEVNDVLDKLSQNTSA
SDQLEVLDPFLDRLTITEVRFFFQIILKESMLSFFERSFFIAWHPDAFNLYKVCNDIKKV
FWLLTDPEKRLTPQQLCVQPMYSFIPQSSKSLTLSYENLCKKMKSGMSLSDKDPKLVNLY
KDEGIQDHFLIEEKIDGDRMLMHMVEGNFKWHTRRRRDYTFIYGENYHLGSLTKHLTGAF
HKNVKSIVLDGEMVAWSKDRQLVLPFGTLRSAAVQEALRQFDVVDVYEGNNSWPLFIIFD
ILHLNGQDLSNLPLFYRKDLLSKVVTNVPHRFEILEWVKASTPDDIKRNMQRIVSERNEG
IMVKSFLSKYRVHSRDSTWIKVKPEYLENFGENLDLVVVGKIGRIKTSYICGLRDEEEEG
CFKSFCMVANGFSKAVYRQIESKLYNFWVNYKERKPPEDIVKFGTRKPDFWINPANSIVL
EIKARSIEVTAETPYAAGSTLHNLWCRAVREDKGYEECITLQQYQELKMRYSTDIFKQQT
VNRARKRGFENSIYDKFATKKRQRIVPKSDVFQGLHFVVATDARDLQSHELITKEEIERR
VKEYGGSILLHPKQENIQARNIIILGQYVTPRISMWVKEGFDIIRPQWVFDCIRYHTILG
IEPQHIEQSGNAKLRRSASETTDKYGDSYVISFPSSKGLFKWLKKIPMSQQLSAGCLEDC
RKDFYNAEKLSNMSLFAGSHFYVLEGGDNSTDNAIHKQAQRRILRFGGSLSLDATNCTYV
VVPDEVLTNKKLQEAVRITSRKIAEGYEEGKKIPIIVMQSFINESIHQAKIVASEDFRVV
I
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgtcgacgtcttttctagacaatgttaaggagcctgagaactttaatcctgaa
ccggcaccatttgatcttatcatctcggagctagttttaaagttggaatctacaaaccat
gaaaatatggctccctttggcacggtgagcgctaaaaaggtgaatatcattgaagagttc
ataaaattatggagaacgcactttggtgtcaatatctctcctgcgctttcccttattttc
cccaataaagacagtaggaagtattttattaaagatgttgctctaacacggctagtgatt
aaactcttgcgactacagcaaggatcgactgactatctgataataaaaaattggaagaaa
tcttaccaacaaaagattcaattaacgggctctaatgaacatcgactgactggcgacttg
cccttgattatcgctcgaataatgctgagaagaagagatcctaattccgtggttgaaact
tctgtcactgtaactgaagtaaacgatgttcttgataaactcagccaaaataccctggca
tctgatcaattggaagtattggacccattcttggacagattaacaatcactgaagtccgt
tttttctttcaaatcatcttgaaagaatcaatgttgtccttctttgagcgcagctttttt
attgcgtggcatcctgatgcatttaatctttacaaggtttgtaatgacataaagaaggta
ttctggctcctaacagacccagagaagagattgaccccacagcaattatgtgttcaaccg
atgtattcatttattccacagtcgtcgaaatccttaacactttcttacgaaaatttgtgc
aagaaaatgaagtctgggatgtctttgtcagacaaggatcctaaactcgttaacttatac
aaggatgaagggattcaggaccattttttaattgaagaaaaaatcgatggagatagaatg
cttatgcatatggtggaaggaaacttcaagtggcacaccagaagaaggagagactatact
ttcatttatggtgagaactatcatcttggatccttgaccaaacacttaaccggcgctttt
cataagaatgtgaaaagtattgttcttgacggtgaaatggtagcatggagcaaagatcgt
caattagtacttccatttggaactctcaggtccgctgcggttcaagaagcactaagacaa
ttcgatgtggttgatgtctatgaagggaacaatagctggccattgttcatcattttcgat
attctacatctaaatggacaagacttgagcaacttgccgttattctaccgtaaggatttg
ttgagcaaagttgttaccaatgttccacataggttcgaaatccttgaatgggttaaggct
agcacacctgatgatatcaagcgaaatatgcaacgcatcgtatccgaaagaaacgaggga
attatggtgaagtcattcttgctgaagtatcgtgtccatagcagagattccacgtggata
aaagtaaaacctgagtacttggaaaacttcggcgaaaaccttgatttagtggttgtgggc
aaaattggaagaattaaaacatcgtatatttgtgggcttcgggatgaagaagaagaagga
tgcttcaagctgttttgtatggttgctaatggcttcctgaaggcagtataccgtcagatt
gaatcaaagttatacaatttttgggtaaattacaaagaaagaaaaccgcctgaagacata
gtgaagtttgggacaaggaaaccagatttttggatcaatcctgcaaatctgattgttttg
gaaatcaaagcgaggtccattgaggttaccgctgagacaccttatgcggctggactgacc
ttacataatctatggtgccgtgctgtcagagaagacaaggggtacgaggagtgtattact
ttgcagcagtaccaggaacttaaaatgagatactcgacggatatcttcaaacaacaaaca
gtcaaccgtgcaaggaagagaggatttgaaaattccatttatgataagttcgctactaag
aagagacagcggatcgtgccaaaaagcgacgtatttcaagggctacattttgttgttgcc
acagacgcgagagatctccagagccatgagcttataacaaaagaagagatagagcgtcgt
gtgaaggaatatggtgggtcgatattgctacacccaaaacaagaaaatatccaggcacga
aacatcataattttgggtcaatacgttacccctcgaatatcaatgtgggttaaggaaggt
tttgatatcattcgaccgcaatgggtttttgactgtatacgctaccatactatactaggg
attgaaccacaacatatcgagcaatctggaaatgcaaaattaagacgctctgcttcagaa
acaacagacaagtatggggatagttatgtaataagcttccccagtagcaaaggattgttc
aagtggctcaaaaaaatacccatgtctcagcaactttcggcaggatgtctcgaagattgc
cgcaaagacttttacaatgcggagaagttgtccaacatgtcgctattcgcaggttcgcat
ttttatgtcttagaaggcggagacaatagtacagataacgcaattcataaacaagcacaa
agaaggattctccgctttggtggctccctatccttggatgccactaattgcacatacgtg
gttgtaccagatgaagttctcacgaataagaagctacaagaagcggttcgaattacaagc
cggaaaatcgctgagggatacgaagagggcaaaaaaatacccataatagtaatgcagtct
tttatcaatgagagcattcaccaagccaaaattgtggctagtgaggattttagagtggtc
atatga
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