Clavispora lusitaniae CBS 6936: A9F13_28g00418
Help
Entry
A9F13_28g00418 CDS
T05147
Name
(GenBank) putative RNA polymerase II transcription factor subunit
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
clus
Clavispora lusitaniae CBS 6936
Pathway
clus03022
Basal transcription factors
clus03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
A9F13_28g00418
09124 Replication and repair
03420 Nucleotide excision repair
A9F13_28g00418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clus03021
]
A9F13_28g00418
03400 DNA repair and recombination proteins [BR:
clus03400
]
A9F13_28g00418
Transcription machinery [BR:
clus03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
A9F13_28g00418
DNA repair and recombination proteins [BR:
clus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
A9F13_28g00418
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
EnY2
AXE1
Motif
Other DBs
NCBI-ProteinID:
OVF04341
UniProt:
A0AA91PV59
LinkDB
All DBs
AA seq
511 aa
AA seq
DB search
MSANSFKLTVNEHLEGLPKVIQSKLYDAPATCLSIFRLLPPLAKFYIVSMVFTDKPVAVK
DLEKWCQPQARKLQYESFKRLRALHLIEEDQSGTHVRLHQTFRNNFRDCLTGSQAPNAFG
IIVPGSDKHPIDVKFLDQFASQKWETILHFMVGTELPTVPSKSVLSLLKSGGLMEGHGTS
AYSLKITNSGFQFLLQDVNVQIWTLLLEYLNLTQELNMDPVDVLNFIFILGSLELGKAYA
VSSLSDTQLSMLPDLRDYGLVYQRSENSTRFFPTRLATTLTSESTGLKTPSMALNQTLED
PGAKDQEHVTSEAGESQSGQIILETNFKLYAYTNSPLEIAILNLFVNLKVRFANMVIGQI
TRESIRKALYNGITADQIIKFLETHAHSQMRTSAKEKLDKKIEFDASHNINTAGGAPQSK
SSDSGVAQHRLEILPPNVVDQIKLWQLELDRIQTFEGYLFKDFKNQNEYDVLCNYATEVG
VLLWSDKTKLRFFVTAEGMHQVADFASRKFR
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctaatctgtttaaactcaccgtcaatgagcatttggaagggcttcctaaggtg
attcaatctaaattatatgatgcaccagcaacatgtttgtcgatttttcgtttacttccc
cctctcgctaaattttacattgtgagtatggttttcacagacaagcctgttgccgttaaa
gatctagaaaaatggtgccaacctcaagctcgcaaacttcagtatgagtctttcaagcgt
ctccgcgctttgcatttgatagaggaagaccagagcggaactcatgttcgcctacatcaa
actttcagaaacaacttcagagactgtttgacaggttcacaggcccccaatgcattcggt
ataattgtacctggctcggacaagcatccaatagatgtgaagttcctcgatcaatttgca
tcgcagaagtgggaaacaattttgcattttatggtgggaacggaactcccgactgtgcct
tccaagtctgtactctcgcttttgaaactggggggcctcatggaagggcatggtacgagc
gcgtatagtctcaagattacgaacagtggctttcagttcttgttgcaggatgtcaacgta
cagatatggactctattgttggagtaccttaatttgacgcaagaattaaatatggatccc
gtcgatgttttgaatttcattttcatcctaggatcgctagagttaggcaaagcatatgcg
gtctctagcttaagtgatactcaacttagtatgttgccagacctcagagactatgggctc
gtctatcaacgatcggaaaattctacgagattcttcccaacgagattggccactacgtta
acttcagagtccacgggattgaaaactccgtcgatggctttaaatcaaaccttggaagac
cctggagcgaaggaccaggaacatgtcacctcagaggccggtgaatctcagctgggtcag
attattttggaaacgaacttcaagctttatgcatatacaaactcacctctagagattgct
atattaaatttgtttgtgaatttgaaagtacgtttcgccaatatggttattggtcaaatt
acaagagagtctatcaggaaagcactttataatggaatcactgcagaccagataatcaag
tttctcgagactcatgcccattcccagatgagaacttctgcaaaggagaaattggataag
aaaattgaatttgatgccagccataatataaacacagccggtggagcaccacaatccaag
tcttctgactccggtgtcgctcagcatcgtttggaaatccttcccccaaatgtggtagat
caaataaaactttggcagttggagttagaccgaattcagacatttgaggggtatcttttt
aaggacttcaaaaatcagaatgagtatgatgttttatgcaattatgctacagaagttggt
gtgcttctttggtcagataagacaaaattgcgctttttcgttacagcagaaggaatgcac
caggtggccgacttcgctagtcgtaaatttcggtga
DBGET
integrated database retrieval system
