Columba livia (rock pigeon): 102086200
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Entry
102086200 CDS
T02912
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X4
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
clv01002
]
102086200 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clv04121
]
102086200 (USP47)
Enzymes [BR:
clv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102086200 (USP47)
Peptidases and inhibitors [BR:
clv01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102086200 (USP47)
Ubiquitin system [BR:
clv04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102086200 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Sad1_UNC
Motif
Other DBs
NCBI-GeneID:
102086200
NCBI-ProteinID:
XP_013225480
UniProt:
A0A2I0MHM5
LinkDB
All DBs
Position
Unknown
AA seq
1361 aa
AA seq
DB search
MFWSCRQSIFAEMKKKFSQVESAAEEPRVLCIIQDTTNSKAVNERVTLNLPASTPLKRLF
EDVASKVGYANGTFDLVWGNGDNVSDTTPIDQNSDKTILDAGFEPGKKNFLHLTERDGEQ
PHIMPETSGTTEDSAQDRFIGPLPREVSVGCTNDYVSQSYSYSSVLSKSETGYVGLVNQA
MTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKKRAIETT
DVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLEC
GYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPNQYFCERCKKKCDAR
KGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSVFIDVEDEKSPQTESC
TDSGAENEGSCHSDQMSNDFSNDDGVDEGICLESNSAAERISKAGNEKSSLLYELFSVMV
HSGSAAGGHYYACIKSFSDDQWYSFNDQHVSKITQEDIKKTYGGSSGSRGYYSSAFASST
NAYMLIYRLKDPTRNAKFLEAHEYPEHIKQLVQKERELEEQEKRQREIERNTCKIKLFCM
HPTKQIMIENRLEVHKDRTLKEAVEIAYKLMDLEEAVPLDCCRLVKYDEFHDYLERSYEG
EEDTPMGLLLGGVKSTYMFDLLLETRRPDQIFQCYKPGEVMVKVHVVDLKTESVAPPISI
RAYLNQTVSEFKQLISKATHLPAETMRVVLERCYNDLRLLNVSSKTLKAEGFFRSNKVFI
ESSESLDRHVAYTDSHLWKLLDRHANTIRLYVSLPEQSPGSQFRRAVYQKSSGDVGNLDE
ACERVKGPVGSMKSVEAILEESTEKLKSLSLQQQQEGDNGDSSKSTEASDFENIESPLNE
IDSSASAENRELENQIQISDPENLQSEERSDSDVNNDRSTSSVDSDILSSSHSSDTLCNV
DNAPLPLANGLDSHSITSSRRSKANQGKKETWDTAEEDSGTDSEYDESGKSRGEAQYMYF
KSEPYTADEGSGEGQKWLVVHVDKRITLSAFKQHLEPFVGVPSSHFKVFRVYASNQEFES
VRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEPEPCKFLLDAVFAKGMTVRQ
SKEELLPQLREQCGLDLTIDRFRLRKKTWKNPGTVFLDYHIYEEDINISSNWEVFLEVLD
GIEKMKSMSQLAVLSRRWRPSEMKLDSFQEVVLESSSVEELKEKLSEISGIPLENIEFAK
GRGTFPCDISILEIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDKTEELMELTDEQRNE
LMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgttttggagttgcagacaaagtatttttgctgaaatgaagaagaaattttcacaggtg
gaaagtgctgctgaggaacccagggtgctgtgtataatacaagataccacaaattccaag
gcggtgaatgagcgtgttaccttgaacctgccagcttccactccacttaaaaggctgttt
gaagatgtggcttcaaaagtgggctacgcgaatggaacttttgatttggtttggggaaat
ggagataatgtatctgatacgactcctatagaccagaacagtgacaaaactattcttgat
gctggttttgagccagggaagaagaactttctgcatttgacagagcgagatggtgagcag
cctcatataatgccagagacgtcaggtacaacagaagacagtgcacaagacagatttata
ggtcctcttccaagagaagtctctgttggctgtaccaatgactatgtcagtcaaagctat
tcttattcttcagtcctgagcaaatcagagacaggttatgtggggctagtaaatcaagca
atgacttgctacttgaacagccttctacaaacacttttcatgactcctgaatttagaaat
gcattgtataaatgggaatttgaagaatctgaagaggatcctgtgacaagtattccctac
cagcttcaaagactgtttgttttactgcagaccagcaaaaaaagagcaattgaaacaaca
gatgttacacggagttttggatgggatagtagtgaggcatggcagcaacatgatgtgcag
gagctttgtagagtcatgtttgatgctttggagcagaaatggaagcaaacggagcaggcc
gatcttataaatcagctgtatcaaggcaaactgaaggactatgtaaggtgtctagaatgt
ggctatgaaggctggagaatcgacacttacctggatattcctttggtgatccggccgtac
ggctccagccaggcgtttgctagcgtggaagaagcactgcatgctttcattcagcctgag
attcttgatggccccaatcagtatttttgtgaacgatgcaagaagaaatgcgacgcaagg
aagggtctgcggttcttgcattttccatatctgctgacattgcagctgaagagatttgac
tttgattataccactatgcacagaattaaactcaatgatcgtatgacttttcctgaggag
ttagacatgagtgtcttcattgatgttgaagatgagaaatctcctcagactgagagttgc
actgatagtggagctgaaaatgaaggcagttgtcacagtgatcagatgagcaatgacttt
tctaatgacgatggagttgatgaaggaatctgccttgaaagcaatagtgcagccgaaaga
atttctaaagctggcaatgaaaagagttctttactgtatgagcttttttctgttatggtt
cattctggaagtgctgctggtggccattattatgcctgtataaaatcttttagtgatgac
cagtggtacagctttaatgatcagcatgttagcaagataactcaggaagatattaagaaa
acatatggtggatcttctggaagcagaggctattattccagtgcttttgctagctccaca
aatgcatacatgcttatatatagactgaaggatccaacgagaaatgcaaagtttcttgag
gcacatgagtatccagagcatattaaacaattggtacagaaagaaagagaactggaagaa
caagaaaagaggcaacgtgaaattgagcggaacacttgcaagataaagttgttctgcatg
caccctacaaaacaaataatgatagagaacagattagaagttcataaggacaggacactg
aaggaagctgtggaaatagcttacaagttaatggatttagaagaggctgttcctttggat
tgctgtcgtcttgtcaaatacgatgagtttcatgactacttggaacgctcttacgaagga
gaagaggatacaccaatgggtttattacttggaggtgtcaaatcaacgtacatgtttgac
ttactgttggaaacaagaagacctgaccaaattttccagtgctataaacctggagaggtc
atggtaaaggttcacgtagttgacctgaagactgaatctgttgctcctccaataagcata
cgagcttatttgaatcaaacagtttcagaatttaaacagctaatttcaaaggccacacac
ctgcccgctgaaacaatgcgggtagtgttagagcgttgctacaatgacttgcgtcttctg
aacgtttccagcaaaacactgaaagctgaaggcttttttagaagtaacaaggtatttatt
gaaagctcagagtctttagatcgtcatgtggcatatacagattctcatttatggaaactt
ttggatcgtcatgcaaatacaatcagactgtatgtttcattaccagagcaatcacctgga
tctcaatttagacgagcagtttatcagaagtctagtggagatgtaggcaacttggatgaa
gcctgtgaaagagtaaaaggacctgtaggtagtatgaaatctgtagaggcaattctggaa
gaaagcaccgaaaaactcaaaagcttgtccctgcagcagcagcaggagggagataatggg
gacagcagcaaaagcacagaagccagtgattttgaaaacattgaatcacctttaaatgaa
atagactcttcagcatcagcagaaaacagagaacttgaaaaccaaattcagatttctgat
ccagaaaacctgcagtctgaggaacgatcggattcggatgtaaataatgacaggagcaca
agttcagtggacagtgacatcctcagctccagtcacagcagtgacaccttatgcaacgtg
gacaatgcgccacttcccttggctaatggacttgattctcatagtatcacaagtagtagg
cgatcaaaagcaaatcaggggaagaaagaaacctgggacacagcggaagaagattctgga
acagatagtgaatacgatgaaagtggcaagagcagaggagaagcacaatatatgtacttt
aagtcagaaccctacactgcagacgaaggttcaggagaagggcaaaaatggctggtggtg
catgttgataaaagaattaccctgtctgccttcaagcaacatctggagccttttgttgga
gttccgtcttctcacttcaaagtcttcagagtctatgccagcaatcaagaatttgagagt
gttcggctgaatgagacactttcgtcattttctgatgacaacaagataactattagactt
ggaagagcccttaagaagggtgaatacagagtcaaagtctatcagcttttggtaaatgag
ccagagccatgcaagtttcttctagatgcagtttttgctaaaggaatgactgtccgacag
tcaaaagaggagctgcttcctcagcttcgagaacaatgcggcctagacttgacaattgac
aggtttcgcctacgaaagaaaacctggaagaacccaggcactgtgtttctggattatcat
atctatgaagaagatatcaatatttcaagcaattgggaggtcttcttagaagtacttgat
gggatagaaaagatgaaatccatgtcacaacttgctgttttatcgagacgatggaggcca
tctgagatgaaactagattctttccaggaagtagtgctagaaagcagcagtgttgaagaa
ctaaaagagaagttgagtgaaataagtggaatacctttagaaaacatagaatttgcaaag
ggtagaggaacgtttccatgcgacatttccatactagagattcatcaagacttggactgg
aatcctaaagtatctacactgaatgtctggcctctgtacatttgtgatgatggtgcagta
atattttatagggataaaactgaagaattaatggaattaacagatgagcagagaaatgaa
ctgatgaaaaaagaaagcagcagactccagaaaactggacaccgggtaacctactctcct
cgtaaagaaaaagcactaaaaatttatctggatggagcaccgaataaagatttgactcaa
gactga
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integrated database retrieval system
