Columba livia (rock pigeon): 102088360
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Entry
102088360 CDS
T02912
Symbol
CHPF
Name
(RefSeq) LOW QUALITY PROTEIN: chondroitin sulfate synthase 2
KO
K00747
chondroitin polymerizing factor [EC:
2.4.1.175
2.4.1.226
]
Organism
clv
Columba livia (rock pigeon)
Pathway
clv00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
clv01100
Metabolic pathways
Module
clv_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
102088360 (CHPF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
clv01003
]
102088360 (CHPF)
Enzymes [BR:
clv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
102088360 (CHPF)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
102088360 (CHPF)
Glycosyltransferases [BR:
clv01003
]
Glycan extension
O-Glycan
102088360 (CHPF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
102088360
NCBI-ProteinID:
XP_005498666
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MFSPFCRTRYISTELGMRQRLFVGVLTSKSTLNTLGVAVNRTLAHRLERLVYFTGTRGRK
VPHGMTVVTHSDERPIWNMYQTIRYLLDHYVNDFDWFFLVQDDTYTEAHRIGRLVAHLSI
DTHLYMGRPEEFIGGDTDRRYCYGGFGYLLSRSLLLLLQQHLESCRNDILSARPDEWLGR
CIIDYTAVNCAEEHEGLRYHYFELGKNTDPEREMDLRFQSAFTVHPVLDPLQMYRLHKYF
AQVELERTYQEIQQLQLEIQNASSLSADGDHGATWPIGIPPPFQPKTRFEVLRWDYFTEE
QVYACMDGSPKCELRGADLADVADVVATAMEELNRKYQPVLHVRKQQLVNGYRRFDPTRG
MEYTLDLQVEVVTQKGHSRSVTKRVHLVRPLSEVEIIPMPYVTEASRINVILPLTAHDRD
HAARFLEAYAAAAFESSENAVLTFLFIYDPFEAQQVTQNDIFAPVKAQITKYERKYAEVK
IPWISVKTDAPSQIKVMDIISKKHPVDTLFFVASVGTXGQVFFPIHFQGYNPAIAYHNQV
PPPTLDLLRDAGRFDRDVFHEACFYNADYMAARTRMAGDVQENEDILETLDIYDMFIKYS
NLHVFRAVEPALLQRYRHQACNPRLSEEIYHRCVQSSLEGLGSRSQLAMVLFEQEQGNST
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgttctctcccttctgcaggacccggtacatcagcacagaactggggatgcgacagcgg
ctctttgtgggtgtgctgacctccaagagcacactgaacacactgggggtggccgtcaac
cgcacactggcccatcgcctggagcgcctggtgtacttcactggcacacggggccgcaag
gtgccccatggcatgacggtggtgacacacagtgatgagcggcccatctggaacatgtac
cagaccatcaggtatctgctggaccactacgtgaatgattttgactggttcttcctggtg
caggacgacacctacacagaggcacaccgcatcggccgcctagttgcccacctcagcatt
gacacccatctctacatgggccgtcctgaggaattcattggtggcgacactgaccgacgc
tactgctatggggggtttggctacctgctgtcccgcagcctcctcctgctcctacagcag
cacctggagagctgccgcaatgacatcctcagtgcccggcccgacgagtggctgggccgc
tgcatcatcgattacacagctgtcaactgtgctgaggagcacgagggcctgcggtaccac
tattttgagctaggaaagaacacggaccccgagcgggagatggaccttcgtttccagagc
gccttcactgtccaccctgtgctggatcccctccagatgtaccgactgcacaagtacttc
gcacaggtggagcttgagaggacctaccaggagatccagcagctccagttggagatccag
aacgccagcagcctgtccgctgatggggaccatggtgccacatggcccattggcatccca
ccccccttccagcccaaaacccgctttgaggtgctgcgctgggactacttcacagaggag
caggtctatgcctgcatggatggttcccccaaatgtgagctgcgtggtgcagacctggca
gatgtggctgatgtggtggccacggccatggaggaactgaaccgcaagtaccagccggtg
ctgcacgtccgcaagcagcagctggtgaacgggtaccggcgctttgaccccacgcgcggc
atggagtacacgctggaccttcaggtggaggtggtcacccagaaggggcatagccgttca
gtcaccaagcgtgtgcaccttgtgcgacccctcagcgaggtggagataatccccatgccc
tacgtgacagaggccagtcgcatcaatgtcatcctgccactgacggcccatgaccgggac
cacgctgcccgctttttggaggcttatgcagcagctgcttttgagagcagtgagaatgca
gtgctcaccttcctcttcatctatgacccctttgaggcccagcaggtcacacagaatgac
atcttcgcccctgtgaaggcccaaatcaccaaatatgagcgcaagtatgcagaggtgaag
atcccatggatcagcgtcaagacagacgcaccctcccaaatcaaggtcatggacataatc
tccaagaagcatcctgtggacacgcttttctttgtggccagcgtggggacangagggcag
gtcttcttccccatccactttcagggctacaaccctgccatcgcttaccacaaccaggtg
ccgccccccacgctggacctgctgcgggacgcggggcgcttcgaccgtgatgtcttccat
gaagcctgtttctacaacgctgactacatggcagcacgcacccgcatggcaggtgatgtg
caggaaaatgaggacatcctggagaccctggacatctatgacatgttcatcaaatactcc
aacctccatgtcttccgtgctgtggagcccgccctgttgcagcgctaccggcaccaggcc
tgcaacccccggctcagtgaggagatctaccaccgctgcgtgcagagcagcctggagggc
ctaggctctcgctcccagctggccatggtgctttttgagcaggagcaggggaacagcacc
tga
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