Columba livia (rock pigeon): 102089530
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Entry
102089530 CDS
T02912
Symbol
TYW1
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clv03016
]
102089530 (TYW1)
Enzymes [BR:
clv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
102089530 (TYW1)
Transfer RNA biogenesis [BR:
clv03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
102089530 (TYW1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Wyosine_form
Flavodoxin_1
Radical_SAM
DUF3280
Adaptin_binding
DUF6768
Motif
Other DBs
NCBI-GeneID:
102089530
NCBI-ProteinID:
XP_021138620
LinkDB
All DBs
Position
Unknown
AA seq
748 aa
AA seq
DB search
MIQQMFYKEFLLSDLDVSMDTWSFYTSLVSLWLHRFYIYSVVAVGISIWIIVQFLTTKTR
KKGEKSNGNPPSSEGTEDKLVNGSATLEAKELCVAGVKIFYGSQTGTAKRFAKGLAEAVI
SLCLPVEVISMGDYDPDDCLAEEVTGKKKFLVATYTDGQPTESAAWFCKWLQEAAHDFRF
GKTHLKGLRYAVFGLGNSVYVDHYNTVGRNIDRWLWMLGASRIMTRVEGDCNVAQSKHGS
IEADFEAWRTKFLNRLQALCRGEKKPCSGKCKKGKCKSPGKQSKESSDPEHGASEYENTE
AEELFETSSEEEADAEEAGGTNSVIDVEDLGNIMSHMKKAKRDCELEDGDVGKNLAQENS
GRKEESERREMITPALREALTKQGYKLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIES
HCCMEATPSLACANKCVFCWRHHTNPVGTEWRWKMDQPEMILQEALENHRNMIKQFKGVS
GVRADRLAEAMTAKHCALSLVGEPIMYPEINRFVKLLHQHGISSFLVTNAQFPDEIRNLE
PVTQLYVSVDASTKESLKRIDRPLFRDFWQRFLDSLKALSEKQQRTVYRLTLVKAWNVDE
LKAYADLISLGKPDFIEVKGVTYCGESSASNLTMANVPWHEEVVRFVQDLADLVPDYEIA
CEHQHSNCLLIAHKKFKVDGDWFTWIDYGRFQELVREHERSGGAETFTAADYAARTPEWA
LFGSRERGFDPLDVRYQRKNKARDISGC
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgatacagcaaatgttctacaaggagtttttactttcagatttagatgtctcaatggat
acgtggagcttctacacttccctggtgtccttatggctgcacagattttacatttattct
gttgttgctgttgggatcagcatttggatcattgttcagttcctcaccaccaaaaccaga
aagaagggtgaaaaatccaatgggaatccaccttcttctgaaggaacagaagacaaacta
gtaaatggatcagccaccctggaggcaaaggagctctgtgttgccggggtaaagattttc
tatgggtctcagactggcacagcaaagaggtttgccaaaggtctggctgaagctgttatt
tcactttgtttgcctgtggaagtcatcagcatgggagattatgatccagatgattgttta
gcagaggaggtaacaggaaaaaaaaagttcctggtagctacatacacagatgggcagcca
accgagagcgcagcgtggttctgcaagtggttacaagaggcagcgcatgactttcgcttt
gggaaaacacatctgaaaggcctgagatacgctgtgtttggcttgggaaactcagtttat
gttgatcattacaacactgttggaagaaacattgacaggtggctgtggatgctcggtgcc
agccgcatcatgactcgtgtcgagggcgactgcaacgtggcccagagcaagcatggcagc
atcgaggccgactttgaagcctggagaaccaagttcctcaaccggctccaggcgctctgc
agaggggaaaagaaaccctgcagcgggaaatgcaagaaagggaagtgcaaatctccaggg
aagcagagcaaggagagctcagatcctgaacatggagcgtcagaatacgagaatactgag
gcagaggagttgtttgaaaccagtagtgaggaggaagctgatgctgaggaagctggaggc
acaaattccgtcatcgatgttgaagatctcggcaatattatgagccacatgaagaaagca
aagagagattgtgagcttgaggatggagatgttggaaagaatttggctcaagagaacagc
gggaggaaggaggagagtgagaggagagagatgataaccccggctctgagagaggcgctc
acaaaacaaggttacaagctgattggaagccactctggggtgaagctctgccgatggaca
aagtcgatgcttcgaggccgaggcggctgctacaaacacacgttttacggaatcgagagc
cactgctgcatggaggccacgccgagcctggcttgtgcaaacaaatgcgtcttttgctgg
agacatcacacaaacccagtgggcacagagtggcgatggaagatggaccaacctgaaatg
atcttgcaggaggctcttgagaaccatcgcaatatgatcaagcagttcaaaggcgtgtca
ggagtgagagcagatcgcttggcggaagcaatgacggcaaagcactgcgcactctcgctg
gtgggagagcccatcatgtacccagagatcaaccggttcgtgaagctcctgcaccagcac
ggcatctccagtttcctggttaccaatgcgcagttcccagatgaaattaggaacctggag
ccggtaacgcagctgtacgtcagtgtggacgccagcaccaaagagagcctgaagaggatc
gaccggcccctcttcagggatttctggcagcgctttctggacagtttaaaggccctgtct
gagaagcaacagcgcactgtttataggctgacgctggtgaaagcctggaacgtggatgaa
ctcaaagcctacgctgacctgatatccctcggtaaacccgacttcatcgaggtcaagggt
gtgacatactgcggcgaaagctcggccagcaacctcaccatggccaacgtcccctggcac
gaggaggtcgtgcgcttcgtccaggacctggctgacctcgtccccgactacgagatcgcc
tgcgagcaccaacactccaactgtctcctgatagcccacaaaaagttcaaggtcgatggc
gactggttcacctggattgactacggacgcttccaggagctggtgcgagagcacgagagg
agcggcggggccgagaccttcacagcggccgattacgcggccagaacgcctgagtgggcg
ctgttcgggtccagggaaaggggcttcgatcccctggacgtgagataccagcggaagaac
aaagcgagagacatctcggggtgctga
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