Columba livia (rock pigeon): 102096334
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Entry
102096334 CDS
T02912
Symbol
CHD6
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 6
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clv03036
]
102096334 (CHD6)
Chromosome and associated proteins [BR:
clv03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102096334 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Chromo
Helicase_C
BRK
ResIII
DEAD
CHDCT2
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
102096334
NCBI-ProteinID:
XP_021156487
LinkDB
All DBs
Position
Unknown
AA seq
2771 aa
AA seq
DB search
MSACALCSRTGKITFIPDLMIMKIQKKEKQPPNFKALSCSPMSDAWECEAQDPFGSSEEQ
DEVPSQVTVTAMDTGGQCQCPEEEPDEAPQKRTSTQNGMQDSGGGGTGVKKKRKKKDLGE
QEGGEKASVEVKPKRRREPKEPKEPKKAKEPKKPKEPKQREVAKKPRKPREPKAPKEPKD
KKNGSEPAPRARSRKSSKDTPVEKKKKGKRKNEIPVDSLDLDQDLLSPSVQSPEESAESA
DSQKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDA
NIIEKILASRMVQKEAHPGGLAFEMEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKR
FRNKQAQMKHIFTEPDEDLFNPDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEES
TWELEEDVDPGKIKEFEALQIPPEIKHMVTYPEERPASDSWQKLEKSREYKNSNQLREYQ
LEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWE
REFRTWTEMNAIVYHGSQISRQMIQQYEMVYRDAQGNPLPGIFKFQVVITTFEMILADCP
ELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLE
PQQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTN
IQKKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKT
HSPEAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYT
YERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQN
DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVG
WLSQWGWMEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFA
KASFVASGNRTDISLDDPNFWQKWAKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEE
DELMEFSELDSDSDERPTRSRRFNEKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFK
WHLNEKDMEMICRALLVYCVKHYKGDEKIKSFIWDLITPTKDGQNQALQNHSGLSAPVPR
GRKGKKTKNQMLLPEIKNADWLATCNPEVVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAE
VLGEAADKAFEGTPARELDVLLPDIDYVEIPVDWWNAEADKSLLIGVFKHGYERYNAMRA
DPALCFLEKVGMPDEKLLSAEQGISDGAQDAAERGSVEKEESSGEKLEGLPKQEDVVAAG
LSEPARGMWEPVALSVHXILMSLLMFEAQDGSDSDRSCWPVSSALTARLRRLVTVYQRCN
RKELPPRADMLVPGNHGYWLQDEMFRRASEMDSVNKEMQKRWTRREQADFYRTVSSFGVI
YDQEKKIFDWAQFRAISRLEKKTDESLEKYFYSFVAMCKNVCGLPLWKEDGPPDPDIYVE
PITEERAARTLYRIELLRKVREQVLKCPQLHERLKLCRPSLYLPVWWECGKHDRDLLIGT
AKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRTGLPGPETLCCLYPTNSKLYSSPLYSQV
DRTCESLENEAESHIKLETVDSTMSQAGHSPPHANCETFMSKVRDIISSNYDESSLPDSL
VCMMYDEKACNSEQSSLARDSPSCTDVGSSVAKLSEGKLEGDEDPSSCDADAMRETPFLG
ALQVGCERVDSQNEDAEPSPATPDSGPGPAELCEALPRKGDLASPAPALPARGAVEEVMG
VGLYSRGLHNYDIKVPPEQRFISLLQEKGMEAKSGPSQSHSEEDEEEEEDDDNSEAAADV
VGGLSGPRTSAGCGPDANELGGEEQNSGLPTPEDTCTEDVNGERELLGLGTPEALGEPGP
EGREDHGLDEESSLQHSPGPAQSQALSLPTPLLGAPGAGPPHALGEAWGRGAEGLAGCRE
TLHPQPQGTKQEECEDRDEGEKACGSQSQDGPEKYLEEESKSSASVLPGEMDDLQDARAP
TIAQLLQEKTLYSFSEWPKDRVIINRIDNICHAILKGKWPSSSQQFETQSLLTAPAVASN
AGSRNSFAESEAPDPGFSNGVLISQVQKEGFLAPAFTKDERKHRRPYEFETERDAKQRSL
EQLAAAHIHPPIVLNGWRDAAVDLSRASDGSPGNSSPFPLTTNMAKLGTVNTLQGSLGMD
LSGILQAGLIHPVTGQIVNGSLRRDDAAMRRRRGRRKNVEGMDLIFLKERPLPTRLQDVQ
EDQPQPPQNSPLPDGPVAATSTPQPVPAAGGQAEKAVPNKSLLDWLRQQSDYTLDVPSFG
TSFSDKPKQRRQRCKDPSKLDISSLSGEERVPVVHKGTGRRLGGATAPALKELPRWLDAN
LEYAVAADWADIVKLSGYLPESKFNRILTEPVLRDVGPRRRGRRPRSELIKGPGVVADSS
SGMGPLFMNGLIAGMDLVGLQNMRNMQGIPLTGLVGFPAGFAAVPASEEVKSTLSMLPMM
LPGMATVPQMFGVGGLLNPPMTTTCSATAPTSLTSTTKSGTAGAEKATEDKQSSQDVKKE
TLSEDKPGPSSFSNQTESAITTSSPVAFNPFLIPGMSPGLIYPSMFLSPGISMALPGMQQ
SRHAEPALESQKRKRKKAKGESAQPEPETVPLPEKEAANGQNCTEQPPPPSAEKEQDGAA
EEEREAARDTD
NT seq
8316 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcctgtgccttgtgcagcagaactggaaaaataacattcatcccagatttgatg
ataatgaaaatacagaaaaaagaaaagcagccaccaaacttcaaagcactgagctgctcc
ccgatgtcggatgcctgggagtgcgaggcgcaggacccctttggcagcagcgaggagcag
gacgaggtgcccagccaggtgacggtgacagccatggacacgggtggccagtgccagtgc
ccagaggaggagcctgacgaggctccgcagaagcggacgagcacccagaacgggatgcag
gacagtgggggtgggggcacgggggtgaagaagaaacggaagaaaaaggatctgggagag
caggaagggggagaaaaagcatctgtggaggtgaaaccaaagaggaggagagagcctaaa
gaaccaaaagagcctaaaaaggccaaggagcccaagaagccgaaggagcccaagcagagg
gaggtggccaagaagccccgaaaacctcgggaacccaaagcccccaaggaacctaaagac
aagaagaacggctctgagcctgcccccagagcaagatccaggaagagcagcaaggacacc
cctgtggagaagaagaagaaagggaagaggaaaaatgagataccagtggacagtttggat
ttggatcaggatctcctgagcccatccgtgcagagcccagaggagtctgcagagtcagct
gacagccagaaacgccgctcaggacggcaagtgaagaggaggaaatacaacgaggacctg
gatttcaaggtggtggatgatgatggcgagacaatagctgtgctgggagctgggcgaacc
tccgcgctttccgcctctaccctggcatggcaggcagaggagcctcctgaggatgatgcc
aacatcattgagaagatccttgcctccaggatggtgcagaaggaggctcatcccggaggc
ctggcatttgagatggaggagttctacgtcaagtacaggaacttctcctacctccactgt
aagtgggcaacgctggaggagctggagaaggaccccaggatctcccagaagataaagcgc
ttccggaacaagcaggctcagatgaaacatatttttacagagcctgatgaggatttgttc
aacccagactatgtggaggtagatcgaattctggaggtggctcacacgaaggaccctgac
accggggaggaggtgactcactacctggtgaagtggtgctcgctgccctacgaggagagc
acctgggagctggaggaggatgttgacccagggaagattaaagagttcgaagccctccaa
atccctccagaaatcaagcacatggtaacgtacccagaggagcgcccagcatctgactcc
tggcagaagctggagaagtcccgggagtataagaacagcaaccagctgcgggagtatcag
ctggagggaatgaactggctgctctttaactggtataacaggaagaactgcatcctggct
gacgagatggggctggggaagacaatacagtcaatcaccttcctctcagaaatattcctg
atgggcatccacggccccttcctcatcatcgcacctctctccaccatcaccaactgggag
agggagttccgcacctggacggagatgaatgccatcgtgtaccacggcagccagatcagc
cggcagatgatccagcagtacgagatggtgtacagggacgcacagggtaaccctctccct
gggatcttcaagttccaggtggttatcaccacctttgagatgattcttgccgactgcccg
gagctgaaaaagatccagtggcgctgtgtggtcattgatgaggctcatcgcctgaagaac
aggaactgcaaactcctggaggggctgaagctcatggccctggagcacaaggtgctgctg
acagggacgcccctgcagaactcggtggaggagctcttcagcctcctgaatttcctggag
ccacagcagttcccctcagagacggccttcctggaggagtttggagacctgaagacagag
gagcaggtgaagaagctccagtccatcctgaagcccatgatgctgcgacggctgaaggac
gacgtagagaagaatttggcacccaagcaggagaccatcattgaggtggagctgaccaac
atccagaagaaatactaccgggccatcctggagaagaacttctccttcctctccaagggt
gccaaccagcataatatgcccaacctcatcaacaccatgatggagctgcggaagtgctgc
aatcacccatacctgatcaatggggcagaggagaagatcctggaagatttccgtaaaaca
cacagcccagaggcaccggacttccagctgcaggcgatgatccaggcggcagggaagctg
gtgctcattgataaactgcttcccaagctgatcgccggtgggcacaaggtgctcatcttc
tcccagatggtgcgctgcctcgacatcctggaagactatctcatccagaggcggtacacc
tatgagcgcatcgacgggcgggtgcgcgggaacctgcgccaggctgccatcgaccgcttc
tgcaagcccgactcagatcgcttcgtctttctcctgtgcacacgggcaggcgggctgggc
atcaacctgactgctgctgacacctgcatcatctttgattcggactggaacccgcagaac
gacctccaggctcaggctcgctgccaccggatcgggcagagcaaggcggtgaaagtctat
cgcctcatcaccaggaactcctacgagcgggagatgttcgacaaggccagcctgaagctg
ggcctggataaggctgtgctgcaggacatcaaccgcaagggcagcaccaacggggtaggt
tggctgtcacagtggggctggatggaggtggaggacctgctgcggaagggtgcctatggt
gctctcatggatgaggaggatgaaggatcgaagttctgcgaggaagacattgatcagatc
ctccagcgcaggacacagaccatcacgatccagtctgaggggaagggctccacctttgcc
aaggccagcttcgtagcatcaggaaacagaactgacatttccttagatgaccccaacttc
tggcaaaagtgggccaagatagcagagctcgatacagacgccaagaatgaaaaggagagc
ctggtcatcgacaggccccgggtgcggaagcaaaccaaacactacaactccttcgaagag
gacgagctgatggagttctccgagttggacagtgactcagacgagcgacccacacgctcg
cggcgcttcaacgagaagacacggcggtacctgcgggctgagtgcttccgcgtggagaag
aacctgctcatatttggctggggacgctggaaagatatcctgacccatgggcggttcaag
tggcacctgaatgagaaggacatggagatgatctgtcgggccttgctggtctattgcgtc
aaacactacaagggggatgagaagatcaagagttttatctgggatctcatcacgccgacc
aaggatggccagaaccaggctctgcagaatcattcaggcttgtcagcaccggtgcccaga
ggcaggaaagggaagaagacaaagaatcaaatgctgcttcccgagataaagaacgcagac
tggctcgccacctgcaaccccgaggtcgtcctgcatgatgacagctacaagaagcacctc
aagcagcactgcaataaggttctgctgcgggtgcgaatgctctactacctgaaggctgaa
gtgcttggggaggctgcggacaaagcctttgaggggacccctgccagggagctggacgtg
ctgctgccagacatcgactacgtggagatcccggtggactggtggaatgctgaagctgat
aaatccctgctcatcggcgtcttcaagcatggttacgagaggtacaacgccatgcgggcg
gacccggcactgtgctttctggagaaggtgggcatgccggacgagaagctgctctctgca
gagcagggcatcagcgacggggctcaggatgctgctgaaaggggcagcgtggaaaaggaa
gagagcagtggagaaaagctggaggggctgccaaagcaggaggacgtcgtggctgctggg
ctctcggaaccagccagagggatgtgggaacctgtggctttgagtgtgcattaaatacta
atgtccttgctgatgtttgaagcccaggatggctccgactcagacagatcctgctggcct
gtgtcatctgccctcacagccagactgcggaggctcgtcaccgtctaccagcgctgcaac
cgcaaagagctgcctccccgtgccgacatgctggtgcctggtaaccatggatactggctg
caggacgagatgttcaggagagcctctgagatggactcagtgaacaaagaaatgcagaaa
aggtggaccaggagggagcaggcagatttctaccgcaccgtctcctcctttggggttatc
tatgaccaggagaaaaagatctttgactgggcccagttccgagctatctctcgactggag
aagaagacagatgagagcctggagaagtacttctacagcttcgtggccatgtgcaagaat
gtctgtggtctcccactgtggaaggaggatggtccccccgaccctgacatctatgtggag
cccatcacggaggaacgtgctgccagaaccctctaccgtatcgagcttctgcgaaaggtg
cgcgagcaggtgctcaagtgtccgcagctccacgagcggctcaagctgtgccggccgagc
ctctacctgccggtgtggtgggagtgtggcaaacatgaccgggacctgctgatcggcacc
gccaagcacggcctgaatcgcactgactactacatcatgaatgacccccagctgtctttt
ttagatgcatacaggaactatgcccagcataaaagaacggggctcccaggcccagaaacc
ctgtgctgcctttacccaactaactccaagctctacagttcccctctgtacagccaggtg
gaccggacttgcgaatccctggagaatgaagctgagagtcacatcaagctagaaactgta
gacagcaccatgtcccaggctgggcacagtcccccgcatgcaaactgtgaaactttcatg
tctaaagtccgggacatcatttccagtaactacgatgagagctctctgccggactcgctg
gtgtgcatgatgtacgacgagaaggcctgtaacagcgagcagagctccctcgcccgagac
agcccgagttgcacagatgttggaagcagcgttgctaagctctctgagggcaaactggag
ggggacgaggatccatccagctgtgatgcagatgccatgagagagacgcccttcctaggg
gctttgcaggtgggctgtgagcgcgtggacagtcagaatgaggacgctgagccttccccg
gccacccccgacagcggtcctggccccgcggagctgtgcgaagccttgccgcggaaggga
gacctcgccagccccgcgccagcgctgcctgcgcgtggggccgtggaagaggtcatgggc
gtggggctctacagtcgcggtcttcataactatgacataaaggttcctcctgagcagagg
ttcatcagtttgctgcaggagaagggaatggaggcaaagtcagggccaagccagagccac
agcgaggaagatgaggaggaagaagaggatgatgataactctgaggcagcagcagatgtt
gtgggaggcttgagcggtcccaggaccagtgccggttgtggccccgatgctaatgaactg
gggggtgaggagcagaactctggtctccccacacctgaggacacttgcacagaagacgtg
aatggcgagagagagttgctggggctggggacacccgaagcgctgggggagcctgggccg
gagggcagggaggaccatggcctggatgaggagagcagcctgcagcactcaccgggccca
gctcagagccaggctctcagcctgccgacaccgctgctgggggcccccggagcagggccc
ccccatgccttgggggaggcctggggccgaggggccgaggggctggccggctgcagagag
accctgcacccccagccccaagggacaaagcaagaagagtgtgaggatagagacgagggg
gagaaagcctgcggcagccagagccaagatggtccggagaagtacttggaggaagagagc
aagagttctgcttctgtcctgcctggagagatggacgaccttcaggatgcccgcgcaccg
accatagcccagctgctgcaggagaagacgctttactccttctctgagtggcctaaggac
cgtgtgatcatcaaccgcattgacaacatctgccacgccatcctgaagggcaagtggcct
tcctccagccagcagttcgagacacagagcctgctgacggccccggcggtggccagcaac
gccggcagcaggaacagttttgccgagtcagaagcccccgatcctggcttcagtaacggg
gtgttaatctcacaggtacagaaggaaggtttcctggccccagccttcacaaaggatgag
cggaagcacaggaggccctatgagtttgagacggagagagatgccaaacagaggagcctg
gagcagctggcagcagcccacattcatccacccattgtgctcaacggctggcgtgatgca
gcggtggacttgtccagagcctctgacggttccccagggaactcctctcctttccccctg
accaccaacatggccaaactggggactgtcaacaccctccagggctccctgggcatggac
ttgtctggcatcctgcaggcagggttaatccatcctgtcacgggacaaattgtaaatggc
agcctccgaagagacgatgctgccatgaggaggagacggggcaggaggaaaaatgtagaa
gggatggacctcatcttcttgaaggagaggcctcttcctaccaggctgcaggatgttcag
gaggatcagccgcagcccccccagaacagccccctccccgatgggccggttgctgctacc
tcaaccccacagccggtcccagctgcaggcggccaagcagagaaggccgtccccaataag
agtctgctcgactggctccggcagcagtccgactacacactcgacgttcccagctttggc
acaagtttttcagacaagcccaagcagaggaggcaacgctgcaaggaccccagcaaactg
gacattagctcactctcaggagaggagcgggtgcctgtggtacataagggtaccggacgg
cggttagggggagccacagcaccagcattgaaggaattgccaaggtggcttgatgcaaac
ttggagtatgctgttgcagctgactgggctgacattgttaagctttcaggctacttaccg
gaaagcaaattcaatcgcatcctaaccgagcccgtgctccgagacgtggggccccgccgc
agggggagaaggccccgaagcgaactcattaaaggccctggtgttgttgcagattcgtct
tctggaatgggaccattgttcatgaatggactgattgctgggatggatctagtgggactt
cagaacatgagaaacatgcaagggatccctctgaccgggctggttggctttcccgctggg
tttgccgcagtgcccgccagcgaggaagtgaaaagcaccctcagtatgttgcccatgatg
ctgccgggcatggccaccgtaccccagatgtttggcgttggaggacttctcaatcccccc
atgacaacgacctgtagtgcgactgctccgacttcgttaacaagcacaacgaaaagcggt
acagctggcgcagagaaagctactgaggacaaacagagcagccaggacgtgaaaaaagaa
actctctcagaagataagcctggtcctagttcgttttctaatcagacagaatccgcaata
actaccagtagtcctgtagcttttaacccgtttctcatcccagggatgtctcctggactg
atctatccctccatgtttctgtcccccggcatcagcatggcgctgcccggcatgcagcag
agccggcacgccgagcccgccctggagagccagaagcgcaagaggaagaaggcgaagggg
gaatcggcacagccagagccagaaactgtcccgctgcccgagaaggaagccgcgaacggt
cagaactgtacagagcaaccgccgcctccgtcggcagagaaggagcaggacggagcagcg
gaggaggagcgcgaagcggctcgcgataccgattag
DBGET
integrated database retrieval system
