Columba livia (rock pigeon): 102097611
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Entry
102097611 CDS
T02912
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03250
Viral life cycle - HIV-1
clv04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102097611 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
102097611 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clv03400
]
102097611 (SAMHD1)
DNA repair and recombination proteins [BR:
clv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
102097611 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
HD_assoc_2
PDEase_I
HARE-HTH
Motif
Other DBs
NCBI-GeneID:
102097611
NCBI-ProteinID:
XP_021156465
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MDEKKVFNDPIHGHIEIHPLLVRIIDTPQFQRLRYIKQLGGTYFVFPGASHNRFEHSIGV
GYLAGCLVRELKERQPELGITQRDILCVEIAGLCHDLGHGPFSHMFDGRFIPLTRPDLKW
KHETASVKMFEHLIASNNLEEVMEDYHLVLKEDMIFIKEQIGGPIDETASDNPWPYRGRP
KEKGFLYEIVANKKNGIDVDKWDYFARDCHHLGIQNNFDYKRLLKLIRVCETENQKVICT
RDKEAENLYDMFNTRHLLHRRAYQHKVGNVIEIMITEAFQKADKYWKIEGSGGRLYQIST
AMEDMEAYTKLTDNIYLEILHSTSPELEEAREILHKIQRRELYKFLGETRPESKDVSKNN
ELKESFAKSKPKVNPPDVEIKAEDIIVDVINMDYGMKDQNPIDKVRFFCKGRSYKTITIN
EDQVSRILPKTFSEQVIRVYCRNQDPDVFLAAKQYFVQWCIDNDFTKPQDGDVVAPHLTP
MKRSWNKTRNDEHRTPERSCRQKLSFDK
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaagaaggttttcaacgatcccattcatgggcacattgagatacatcccctt
cttgtccgcatcatcgacacacctcagtttcagcgcctccgatacattaagcagctgggt
ggcacttactttgtgtttccaggagcctctcacaaccgctttgaacactccataggagtg
ggttacctggcaggatgcctggttcgtgagctgaaggagagacaaccagaactgggtata
acccagcgagacatcctctgtgtagaaatcgctgggctttgtcatgatttgggtcatggg
ccattttcacacatgtttgatggaagatttattccactcactcgtccggatttgaaatgg
aagcatgaaactgcttctgttaaaatgtttgagcacctgattgcttccaataacctagaa
gaagtcatggaggactatcatcttgtcctgaaagaagacatgatcttcatcaaggaacaa
ataggagggcctatagatgaaactgcttctgacaatccgtggccgtaccgtgggcggccg
aaggagaaaggtttcctgtatgaaatagtggctaacaaaaaaaatggcattgacgttgac
aaatgggattatttcgcaagggattgccatcacctaggaatccagaataactttgattat
aaacgattacttaaactcatccgggtctgcgaaacggaaaaccagaaggttatctgtacc
cgagacaaggaagctgaaaatttgtatgatatgttcaacacacggcatttgctgcaccgg
cgagcgtaccagcacaaggttggcaacgtcattgaaataatgattacagaagcctttcaa
aaagcagacaaatattggaaaatagagggctctggaggaagattgtaccagatttctaca
gcaatggaggacatggaagcctacactaagctaactgataacatctacctggagattctg
cactcgactagtccagaactggaggaggcacgagaaattctgcataaaatacaacgacgt
gaactatacaagtttttaggagagactcgacctgaatcaaaggacgtttcaaagaataat
gaactgaaggagagttttgctaaatccaagccaaaagtgaatcctccagatgtggagata
aaggccgaagacatcatagttgatgttatcaatatggattatggaatgaaagaccagaat
cccattgacaaagttcgcttcttttgcaagggtcgttcttacaagaccattacgatcaac
gaagatcaggtttcaaggattttacccaagacgttttcagagcaggttatccgtgtttat
tgcagaaatcaagatccagatgtttttttggctgcgaaacagtattttgttcagtggtgt
atagacaatgatttcaccaaaccacaggatggtgatgtggttgcccctcatctgactcca
atgaagagaagctggaataagacgagaaatgatgagcacaggacacctgagcgctcatgc
agacaaaagctttcttttgataagtaa
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