Cellulophaga lytica DSM 7489: Celly_2446
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Entry
Celly_2446 CDS
T01434
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cly
Cellulophaga lytica DSM 7489
Pathway
cly02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cly00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Celly_2446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cly03021
]
Celly_2446
Transcription machinery [BR:
cly03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Celly_2446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
GerE
Sigma70_r4
HTH_24
HTH_23
CaMKII_AD
HTH_11
UQCC2_CBP6
MarR
PCI
HTH_17
ADSL_C
Motif
Other DBs
NCBI-ProteinID:
ADY30263
UniProt:
F0RHJ7
LinkDB
All DBs
Position
complement(2789251..2789862)
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AA seq
203 aa
AA seq
DB search
MSPPLNSDINFINALKSGNTSAYNKLVNDYHQKLCVYALNLTHDRSEAEDIVQNVFMRVW
RKRDKLKANFSIQSFLYKSVYNEFIDHYRKQKNVFPLEKKYLDALHHLVEETDVVSFDNL
IKKVKQEIQNLPPKCKNVFLLSKQEGLTNIEIAEYLNISIKTVEAQITKAFYILRTKINK
KKDSNLFLYFSILKLKRVLLFKS
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgagtcccccattaaatagcgacattaattttataaatgcacttaagtctggaaatact
tctgcatacaacaagcttgttaatgattaccaccagaaactttgcgtttatgcgcttaac
cttacacatgaccgtagtgaggcagaagatattgtgcaaaatgtttttatgagagtttgg
cgcaagcgagacaagctaaaggccaatttttctatacagagttttttgtataaatctgta
tataatgagtttatagatcattatagaaaacaaaaaaatgtttttcctttagaaaaaaag
tatttagatgctttacaccatttggtagaagaaacagatgttgtctcctttgataatctt
attaaaaaggtaaaacaagaaatacaaaatttaccacctaaatgtaaaaatgttttttta
ttaagcaagcaagaagggttaactaatatagaaattgcagagtatttaaatatttctata
aaaacagtagaagcccaaataactaaggctttttatattttacgtactaagattaataag
aaaaaggatagtaatttatttttatatttttctatcttaaaactaaaaagagtactgctt
tttaaaagttaa
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