Caldivirga maquilingensis: Cmaq_0797
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Entry
Cmaq_0797 CDS
T00611
Name
(GenBank) Transcription factor TFIIB cyclin-related
KO
K03124
transcription initiation factor TFIIB
Organism
cma
Caldivirga maquilingensis
Pathway
cma03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Cmaq_0797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cma03021
]
Cmaq_0797
Transcription machinery [BR:
cma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Cmaq_0797
Prokaryotic type
Archaeal type
TFB
Cmaq_0797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
TF_Zn_Ribbon
LysW-like_globular
zf-ribbon_3
Desulfoferrod_N
Sigma70_r4
Zn_Tnp_IS1595
Acc5b_avian_CoV
Auto_anti-p27
Ribosomal_S27e
Lar_restr_allev
RNA_POL_M_15KD
Cyclin_N
HTH_Tnp_ISL3
zf-NADH-PPase
Trm112p
HTH_11
RB_B
OrfB_Zn_ribbon
zf-RRN7
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
ABW01632
UniProt:
A8MCX6
LinkDB
All DBs
Position
complement(830694..831704)
Genome browser
AA seq
336 aa
AA seq
DB search
MSTTQGGSNQQDETRRELIIQKFKLFRREGNNLEFVDQSGQKLRCPICGNTVFIEDAERG
QIVCASCGYVLMEHILDTGPEWRAFTPEEKEDRARTGGPLERVTSEELVTRIETTLKSPD
LKKKLEILKYKKWQQRIRVQTSYERNLVQATHELNRIAHQLGVPKSCMDEALAVYKQVLK
SGLVKGRSVEAIIAACLHMACRMQGMPRSLDEISQYTRAPRKEIARCFRLIARELRIRLP
LSDPRQYVPKIVEQLKLPGDIAKEAIRVLEEAKDKGLTAGKDPAGLAAAAVYIASLLKGE
VRTQKEIAQAAQVTEVTVRNRYKELAKELNIKIPIK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccacacaggggggttctaaccaacaggatgaaaccaggagggaattaataata
cagaagtttaaattatttaggagggagggcaataacctggagtttgttgatcagagcggt
cagaagttaaggtgcccaatatgcggtaacaccgtgtttattgaggatgctgagcgagga
cagatagtgtgcgcctcctgcggttacgtactcatggagcatattcttgacactgggcct
gagtggagggcattcaccccggaggagaaggaggatagggctaggactggtgggccattg
gagagggttaccagtgaggagcttgtaactaggattgaaacaaccttaaagtcccctgat
ttgaagaagaagcttgagattcttaagtataagaaatggcagcagaggattagggttcag
actagttacgagaggaaccttgttcaagccactcatgagttaaataggattgcccaccag
ttaggtgtccctaagtcctgcatggatgaggccctagccgtatataagcaggtccttaag
agcggcttagttaagggtaggagcgttgaggctattatagctgcctgcctacacatggcc
tgtagaatgcaggggatgcctaggagtcttgatgagatttcacagtacactagggcgcct
aggaaggagattgcgaggtgctttaggttaattgcaagggagcttaggattaggttaccg
ttaagtgacccaaggcagtatgtacctaagatagttgagcaacttaaactcccaggggat
attgctaaggaggccattagggttcttgaggaggctaaggataagggcttaaccgctggt
aaggacccagccggcttagctgcagcggccgtctacattgcgtcattacttaagggtgag
gttaggactcagaaggagattgcccaagcagcccaagtcactgaggttactgttaggaat
aggtataaggagcttgctaaggagttaaacataaagataccgattaagtaa
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