Chlamydotis macqueenii (Macqueen's bustard): 104473073
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Entry
104473073 CDS
T08437
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
104473073 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmac03400
]
104473073 (LIG4)
Enzymes [BR:
cmac01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
104473073 (LIG4)
DNA repair and recombination proteins [BR:
cmac03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
104473073 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
DUF6872
SKA1
Motif
Other DBs
NCBI-GeneID:
104473073
NCBI-ProteinID:
XP_010126708
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MASAPASQPSKKTVASRVPFADLCSTLERIQTCKSRPEKIKYFKDFLDSWRKFHDALHQK
EKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKDGKDAAKLLNYRTPA
GSRGDAGDFAMIAYFVLKPRSTKRGRLTIEQVNEHLDVIANNNAAKNKGLLKKSLLQLIT
QSTALEQKWLIRMIIKDLKLGVSQQTIFSVFHPDAAELHNVTTDLEKVCRQLHDPSVSLS
DVSIMLFSAFKPMLAAIADVQQIEKQMNNRIFYIETKLDGERMQMHKDGDVYKYFSRNGF
DYTQQFGASPLDGSLTPFIHNIFKSDIQNCILDGEMMAYNPETQTFMQKGNRFDIKRMVE
DSDLQTCFCVFDVLMVNNQKLGHEILSKRYEILSSVFTPVTGRIHVVHKKNARTRKEVID
ALNEAIDNREEGIMVKDPMSTYKPDKRGEGWLKIKPEYVNGLMDELDLLIVGGYWGKGSR
GGMMSHFLCAIAEKPPPNEKPTVFHSICRVGSGYTMKELYDLGLKLAKHWKPYHRKDPPC
NILCGTEKPEMYIEPCNSVIVQVKAAEIVNSDMYKTDCTLRFPRIEKIREDKEWYECMTS
DMLEDLRSKAEGKLASKHLHIDEYDEPQEKKRKTVPKVRKIIGIAEQFKAPDLSNVSKVS
NVFEDVEFCVMTGTGKYSKSELESRIAECGGSVVQNPGPETYCVIVGAENVRVKNIIASN
KYDVVRAEWLLQCFQTKMLVPWQPAFMIHMSPETKEHFAREYDCYGDSYTADADVAQLKE
VFSRMKDNKVMPLDMIAELEERYSWNSCQLSIFRGSTIYVDCYAVVNEPRTKIHRTTLSI
RALELRFYGAKVVSHLEEGISHVVVGEDHSRVKDMKTLRRTFGKKFKIVSELWVTESVEE
GVPKNENQYLI
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgcacctgcttctcagccttctaaaaaaacagtggcctctcgcgtgcctttt
gccgatctgtgttctactctggagcgcatacagacgtgtaaatctcgcccggagaaaatc
aagtatttcaaggattttctggattcctggagaaaattccatgatgctcttcatcaaaaa
gagaaagatgtcacagattctttttatccagctatgcgacttattctcccacagttggag
agagaaaggatggcatatggaattaaagaaacgatgcttgcaaagctgtatattgaactt
cttaatttaccaaaagatggaaaagatgcggcgaagcttttaaattacaggacacctgct
ggctcacgtggagatgctggagattttgcaatgatcgcatactttgttttaaaacctagg
agcaccaaacgaggcagactgacgatagaacaagtcaatgagcacttagatgtgatagct
aataataatgctgctaaaaacaaaggtctgttaaagaaaagtcttcttcagttaattaca
cagagcacagcgctggaacaaaaatggctcatccggatgattataaaggatctaaagctt
ggtgttagtcaacaaactatattttctgtttttcatccagatgctgctgaattacacaac
gtcacaactgatttggaaaaagtttgcagacaactgcacgatccctctgtctcgcttagt
gatgtttctatcatgttgttttctgcctttaaaccaatgcttgctgctattgctgatgtc
cagcaaattgagaaacaaatgaataaccggatattctacatagaaactaagctggatggt
gaacgcatgcaaatgcacaaagatggagatgtgtataaatatttttcccggaatgggttt
gactatactcagcagttcggcgcttccccccttgatggttcgttaacgccatttattcat
aatatatttaaaagcgatatacaaaattgcattcttgatggtgaaatgatggcttacaat
cctgagacgcaaacttttatgcaaaaaggaaacagatttgacataaaaagaatggtggag
gactctgatctgcagacctgcttctgtgtgtttgatgtattgatggttaacaatcagaag
ttgggtcacgaaatactaagcaaacgatatgaaatcttaagtagcgtttttaccccagta
acgggcaggatacatgttgtacataaaaaaaatgccagaacgagaaaagaagtaattgat
gctttaaatgaagcaattgataacagagaggaaggaattatggtgaaagatcccatgtcc
acctacaagcctgacaaacgtggggagggctggttaaaaatcaagccagaatacgtcaat
gggctgatggatgaactagaccttttaattgttggtggttactggggaaagggctcacgt
ggtggaatgatgtctcattttctgtgcgctattgcagagaagccccctccaaatgagaaa
cctactgttttccactctatttgtcgtgttggctctggctatactatgaaggaattgtat
gatctaggtttgaaactggctaagcactggaagccctaccataggaaggatcctccctgt
aacattttgtgtggaactgaaaaacctgaaatgtacattgaaccttgcaactctgtcata
gttcaggtcaaggcagccgagattgttaacagcgacatgtacaaaacagactgtactttg
agattcccccgaattgagaagataagagaggacaaagagtggtacgagtgcatgacttca
gatatgttagaagatctcagaagcaaagcagaagggaagctggcatctaagcaccttcat
atagatgagtatgatgagccacaagagaaaaaaaggaaaactgtaccaaaggtgaggaag
ataattggaatagctgagcaatttaaagcgcctgacctttccaatgtaagcaaggtttca
aatgtatttgaagatgttgagttttgtgttatgacaggaacgggaaaatactcaaagtct
gaactggaaagcagaatagccgaatgtggtggcagtgtggtacagaacccggggccggag
acctactgtgtcattgtaggagctgagaatgtcagagtgaaaaacatcattgcgtccaac
aaatacgatgtggtgagggcagagtggctccttcagtgttttcaaaccaaaatgctggtg
ccttggcagccagcctttatgattcacatgtctcctgaaacaaaagaacattttgctcgt
gagtatgattgttacggagatagctacacagcagatgcagatgttgcacaactcaaggaa
gtgttctcaagaatgaaggacaataaggtgatgcctctggacatgattgcagagttagaa
gaacgttattcatggaacagttgtcagctcagtatattcagaggaagcactatttatgtg
gactgttatgcagttgttaatgagcccagaaccaaaatccacagaacaacactatcaatt
agagctttggagctccgtttttatggtgcaaaagtagtctctcaccttgaagagggcatt
tcccatgttgttgtaggagaagatcattcccgggtaaaagacatgaaaacactcaggaga
acatttgggaaaaaatttaaaattgtatctgagctgtgggtaacagagtcagtagaagaa
ggagtcccaaagaatgaaaatcagtacttaatctaa
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integrated database retrieval system
