Chlamydotis macqueenii (Macqueen's bustard): 104473161
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Entry
104473161 CDS
T08437
Symbol
RC3H2
Name
(RefSeq) roquin-2
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmac03000
]
104473161 (RC3H2)
04121 Ubiquitin system [BR:
cmac04121
]
104473161 (RC3H2)
Transcription factors [BR:
cmac03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
104473161 (RC3H2)
Ubiquitin system [BR:
cmac04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104473161 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-C3HC4_4
zf-C3HC4_2
Xin
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
104473161
NCBI-ProteinID:
XP_010126753
LinkDB
All DBs
Position
Unknown
AA seq
1195 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNVGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVSTTTGNVISVI
GSPEAAGKMVPSTNGIANLESGVPQLIPRCADTSLRALENTKKGGKTGANGQNVSGSPTE
SLPENKIGSPPKTPVSQAAATSAGPPNIGTEVNSVPPKSSPFVPRVPVYPPHSDNVQYFQ
DPRTQLSYEVPQYPQTGYYPPPPTVPAGVPPCVPRFVRSNNVPESSLPPASVPYADHYST
FPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMD
VMHSSVYQTSLRERYSSLDGYYSVACQPPNEQRTVPLPREPCGHLKTGYDEQLRRKPEQW
AQYHTQKTPLVSSALPMATPSPTPPSPLFSVDFSTEFSESVSDLSGTKFEEDHLSHYSPW
SCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDG
PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSAYGSDST
TSARYAERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLD
EGSRLTLNLLSKEIDLRNGEVKKRTDYTEDCADTKPDRDIELELSALDTDEPDGQGEQIE
EILDIQLGISPQDDQLLNGTTVENGHPLKQHQKESMEQKRQSLGEDLVILEEQKTILPVT
SCFSQPITTSVSNASCLPINTSVSVGSLILKTAHIMSEDKNDFLKPVANGRMVNS
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagaatttctgtcctgcccaatctgctacaacgag
tttgatgagaatgtgcacaaacccatcagcttaggttgctctcacactgtctgtaagacc
tgcctgaacaagcttcatcgcaaggcatgtcctttcgaccagactgccatcaatacagac
atcgatgtgcttcctgtaaactttgcactcctccagttagttggagcccaggtacctgat
catcagactgtaaagttgagtaatgtaggagagaacaagcattatgaagtagcaaagaaa
tgtgttgaggatttggcactctacttaaagccattaagtggaggaaaaggtgttgcaagc
ttgaatcagagtgcgctgagccgtccaatgcaaaggaagctcgtgacgctggtgaattgt
cagctggtggaggaagagggtcgagttagagctatgagagcagctcgatcgctgggagag
agaaccgttactgaactgatcttgcagcaccaaaatcctcagcagctttctgccaatctt
tgggctgctgtcagggcacgaggatgccagtttctaggaccagctatgcaagaggaggca
ctgaaacttgtgttactggcactggaagatggctctgcactctcaagaaaagttctggta
ctttttgttgtacaaaggctagaaccaagatttcctcaggcctctaaaacaagcattggt
catgttgtgcagctactgtatagagcatcatgctttaaggtcactaaaagggatgaagat
tcttctctgatgcaacttaaagaagagtttcgcagttatgaggctttgcggagagaacat
gatgcccaaattgttcacattgccatggaagcaggacttcgaatatcaccagaacaatgg
tcttcccttctttatggtgacttggcacataaatcacacatgcaatccattattgacaag
ctccaatctccagaatcttttgcaaagagtgtgcaagaattgacaattgtcttgcagcgc
acaggggatcctgcaaacttaaacaggctgaggcctcatttagagctgctggcaaacata
gatccaaatccagatgcagcatctccaacgtgggagcagctggaaaatgcaatggtcgct
gtaaagactgttgtacatgggctggtggatttcattcagaactacagtagaaaaggccat
gaaactcctcagccacaaccaaatagcaaatataaaacaagtatgtgccgagaccttcga
cagcaagggggatgtccaagaggaacaaactgtacatttgctcattctcaggaagagctt
gaaaaataccgcttgaggaacaaaaaaatcagtgcaacagtgagaacattcccccttcta
aataaagttggcgtaaatagcaccgtctcaaccacaacaggaaacgtaatttctgtcata
ggaagccctgaagcagcagggaagatggtgccaagtactaatggaatagctaatctagaa
agtggtgttccccaattgatccctcgctgtgcggacacctccttgagagctttggagaac
accaagaagggagggaagactggagccaatggccagaatgtttctggatcccctacagaa
tcactacctgaaaataaaattggttctccacccaagactcctgtaagccaggcagcagct
acctcagctggtcctcctaatattggaacagaagttaattctgtgcctccaaaatccagc
ccatttgttcccagagtacccgtctaccctccacactctgataatgttcaatatttccaa
gatcccaggactcagctgtcatatgaagttccacagtacccgcagacaggatattatcca
ccacctccaacagtaccagctggtgtgcctccttgtgttcctcgctttgtgaggtccaat
aacgttccagaatcctccctcccacctgcttccgtgccatatgccgatcattacagtaca
tttccccctcgagatcgactgaattctccttaccaacctcctcctccgcagccgtatgga
ccagttcctcctgtcccttctggaatgtatgctccagtttatgacagcaggcgcatctgg
cgcccacagatgtacccacgagatgatattattaggagcaattctttacctcccatggat
gtgatgcactcatctgtctatcagacatcattacgtgagagatacagctctttggatggg
tattactctgtggcttgtcaacctccgaacgagcagaggactgtgcctttaccaagggag
ccttgtggtcatttgaagactggttatgatgagcaattaagacggaagccagagcaatgg
gcacagtaccacacgcagaaaactcctctggtatcgtcagcccttcctatggcaacacca
tctccaacaccaccttctcctctcttcagtgtagatttcagcacagagttctcggagagt
gtcagtgatttgagtggaactaaatttgaggaagaccatctctctcactattcaccctgg
tcttgtggcactattggctcttgtataaatgctatcgactcagagcccaaggatgtgatt
gccaattcaaatgctgtgttaatggatttggacagcggggacgttaaaagaagagtgcat
ttatttgaaactcagagaagggcaaaggaagaagatcctataatcccgtttagcgatgga
ccgatcatctccaagtggggtgcaatctccaggtcatcccgcacgggttatcacacaaca
gatcctattcaggccactgcttcccaaggaagtgctacgaagcccatcagtgtatcagat
tatgtcccttatgtcaatgctgttgactcaagatggagcgcctatggctcagattctact
acatcagcacgttatgcagaaagggacagattcatagttacagatttgtctggtcacaga
aagcattccagcactggagatctattgagtattgagttacagcaggccaaaagtaactcg
ttattacttcagagagaggcgaatgcactagccatgcaacagaagtggaattctctagat
gaaggcagtcgtcttaccttaaatcttttaagcaaggaaattgatttgaggaatggtgag
gtaaagaaaaggactgattatactgaagactgtgcagacacaaagccagatcgagacatt
gaattggagctgtcagcccttgatacagacgaacctgatgggcaaggtgaacaaatagaa
gagattctggatatacagctaggtattagtcctcaagatgatcagctgctcaatggaaca
actgtagagaatggacatccactaaagcagcaccagaaagaatctatggaacagaagaga
caaagtttaggtgaagaccttgtgattctggaggagcagaaaacaatcctgcccgtaact
tcttgcttcagtcagccgatcacaacatctgttagcaatgcaagctgcctgcccatcaac
acatcagtcagtgttggcagcctcattttgaaaactgctcacattatgtctgaggataaa
aatgactttttaaagcctgttgcaaatggcaggatggttaacagctga
DBGET
integrated database retrieval system
