Chlamydotis macqueenii (Macqueen's bustard): 104476400
Help
Entry
104476400 CDS
T08437
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104476400 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Big_9
Calx-beta
Motif
Other DBs
NCBI-GeneID:
104476400
NCBI-ProteinID:
XP_010114485
LinkDB
All DBs
Position
Unknown
AA seq
1812 aa
AA seq
DB search
MKSFEKSWLFLLLPVVLRVVCSSFISVNLGVKVMKGQSVFLSEDDLKFSIPREKDVCKVE
VVINEPITQRVGKLTPQVFDCHFLPNEVKYTHNGCPILDEDTVMLRLYRFTETETFVETF
TLHVQLLEPDCNIIKMRSRALEVPEYYGLSRVINKNVLTFDYDRKINLDCTISIASSETH
LPAHGQLITGKVQQEQLRGDQPQSFFSVPEHSLGQQCRNGSCTLGPGVIHNTKMGCEEFL
SMGIRYQHLDPPSPDIDYIPVRLDLTDSRSKILHKTEYAWLPVHIKGAIPNQIPKASAMA
KFILEVDQFILTPMTTTTVDAEDNETPKSLLIFNITKPPPQGFITHLSDHTKAVGSFTWK
DLSDMLIAYQPPNNSHTERRNYEVEFEVHDFYFERSLPIIVHLSIRTTDTNAPRVSWNTG
LSLLEGQSRPITWQHFQIVDNDDIQNVRLVTVDGLQHGRLTVRGGKGFMFTVSDIQAAVV
HYHHDDSDSTKDFVVFRIFDGPHSIRHKFPINILPKDDSPPFLISNVVIEVHEGQTILIQ
GSMLCASDMDSSDDYILFNITKLPQAGEIMKKPGPNMIGYSVSSFLQRDLFNGIIYYHHL
GGEVFEDSVEFVLCDSHDPPNLSEPQVMMVHIIPVDDQLPREAPGVMRHLVVKETEIAHL
TKKHLHFIDVEEQDRELTYTITTSPFFSCTHGHSDAGKLFMVDTIPKLVKDPAALALRSF
TQHAVNYMKVAYMPPLKDIGPEPQQVQFIFSVSNQHGGTLYGICFNITILPVDNQPPEVY
TSHLRVEEGGLSPVTEEHILISDVDTKQEHLFLLLQRQPQHGAVELDGIPMNEVDRLSCR
DLHTLTVRYRHDGSETLTDDVLFAATDGIHFVEFVLQVKVLPVNDEPPVMQTGLIPVLHC
LEGEEVVLSSEYIYATDADSDDMKLMFMLARQPYHGVVRKAGVPVDRFSQADVISGLVTY
KHTSGEIGLTSSIEILMFVVSDGEAGLDVKDCCYDGPLPPPVPLHDSFPVYELNITVLPV
DNQPPSIATGARFVVEEGASAALTTNHLFATDPDTTADDLEFVLVSPPQFGYVENILPSP
GFEKSNIGISIASFQLKHLKALSINYVQARHLRMEPTADHFVLYVTDGLHRSAETPFFVL
INPTNDEVPEFIARNITVQEGEMKELDLSVINAIDLDVPQDRLVFGVVQRPLYGFLINGI
YGNNILHYKELINHDHHTHGLLVHDFSMELLKNGMKLMYMHDNSENLTDSFKIQLSDGKH
KVLKTISVKVIPVNDEKPVLSKKVDIELSMGETRIISSAVLSAEDKDTPRERIYYLFERL
PENGQLQLKVGQGWMTLQTGMKCTQEELDMNLVRYVHTGAIGSKNQDSFTFYLWDGYNRS
PSVDFYINIKDMEKGDIAVFLRPLRVPKGDQGYITTDVLLALDDTDKPEELLYVITSPPQ
YGQIEYVSYPGIPITSFNQMDVARQIVCYVHNTKAVVPEDTFRFIISNGLRTKHGTFVIS
LEAADQTLPTLSRNAGLRLVEGAMAVLSPDVLQLSDPDTAKENLTFLLAQLPQYGHLYYR
GAVLLQYNFTQQDVDNRDVSYKHRGGDSQIDRFTFVATDRTNQGFIVNGRVQSEPVAFTI
QVDHLDKTAPKIVHLHCFSDVELLKNGNYGIYITARSLKASDPNTEDDKIIFKILRGPHY
GYLENITTGGFIQEGFSQKDLNSKTILYVINTSWEEVNSDNVEFQVTDASGNAAVPQRLE
LRWSRIELQQTEYEVCESVGVVSLKITRAGHSAESAFIAVKVNEVSAMLGKDFTVTPVKL
LQFDPGMNQCTE
NT seq
5439 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcctttgagaaaagctggttgtttctactgctgcctgttgtactaagagttgtc
tgctcctcttttattagtgtaaaccttggggtgaaagtgatgaagggacagtctgtcttc
ctgtcagaagatgacctcaagttttccatccccagagagaaggacgtctgcaaagtagaa
gttgtgattaatgagccaataacacagagggttgggaaactaactccacaggtttttgac
tgtcacttccttcctaatgaagtcaaatatacccacaacggctgtccgattttagatgaa
gacacagtcatgcttaggctgtacaggtttacagaaaccgaaacgtttgtagaaacgttc
accctccatgtgcagttgcttgagccagactgtaacatcatcaaaatgcgctcccgtgcc
ctggaagtccccgagtactatggtctgtccagggtgatcaacaagaatgtcctcactttt
gactatgacaggaagataaatctggattgcaccatttccatagcctcttcagaaacccat
ctgcctgctcacggccagctcatcaccgggaaagtgcagcaagagcagcttcgtggagat
cagccacagagcttcttctctgtccctgagcacagcctgggtcagcagtgcagaaatggg
agctgcacactcggaccaggagtcattcacaacacaaaaatgggctgcgaagaatttctg
agtatggggattcggtatcagcaccttgaccctccctcacctgacatcgattacattcct
gtgaggttggatctcacagacagcagaagcaaaattctgcacaagactgagtatgcatgg
ctccctgttcacattaaaggcgctattcccaatcaaatacccaaagcttctgcaatggca
aagttcattttggaagtagatcaatttattttaactcccatgacaaccacaactgttgat
gctgaagacaacgaaactccaaagtccctgctgatattcaacatcaccaagccacctcca
cagggcttcatcactcatctgtctgaccataccaaagctgttggctccttcacatggaaa
gatctcagtgacatgctcattgcttatcagcctccaaataacagccacacagagagaagg
aattatgaggtggagtttgaggttcatgacttctactttgaaaggagtttaccaatcatt
gtgcatctttctatcagaacaacagatacaaatgctcctcgggtttcatggaatacaggc
ctcagcctcctggaagggcaatcccgaccgatcacatggcaacacttccaaattgtagac
aacgatgacatccaaaatgttcgtttggtcacagttgacggcttacagcatgggcggctc
acagtgaggggagggaagggattcatgttcacagtctctgacattcaggctgcagtcgtt
cactaccatcatgatgacagtgattccactaaggactttgtggtatttaggatttttgat
ggcccccacagtattcgccataagtttccaatcaatattctccctaaagatgacagccct
ccatttcttatcagcaatgttgtcattgaagttcatgagggacagacaatcctgattcag
ggctccatgctttgtgcttctgatatggattccagtgatgattacatactattcaatatt
accaagctaccacaggctggagaaatcatgaagaaaccaggaccaaacatgatagggtat
tcagtcagcagttttcttcagagggatctatttaatggaataatttattatcatcatttg
ggaggagaagtatttgaagattccgttgagtttgtgctgtgtgatagccatgaccctccc
aatctctcagagccacaggtgatgatggtgcacattatccctgtggatgatcagctaccc
agagaagccccaggagtgatgcgtcacttggttgttaaggagactgagattgctcacctg
actaagaaacatctccacttcatagatgtggaagagcaagacagggaactaacatacacc
ataaccacttccccatttttctcttgcacgcatggccactcagatgctgggaagctgttt
atggtggacaccatccccaagttggtcaaggatcctgctgctcttgcactgcggtcattt
actcagcatgctgtgaactatatgaaagttgcctacatgccgccactgaaggacattggg
cctgaacctcagcaagtccagtttattttttctgtcagcaatcagcacggtggcactttg
tatgggatctgcttcaatataaccattctaccagtggacaatcaacccccagaggtttat
acaagccatttgagagtggaagagggtggcctgagccctgtcacagaggaacacattctc
atctctgatgtggacacgaaacaggagcatctcttcctcctcttgcagagacagcctcag
catggggcggtggagctggatggcattcccatgaatgaagttgacaggctttcctgcagg
gacctgcataccctgacagtcaggtatcggcatgatggctctgagactctcactgatgat
gtcctctttgctgccacagatggcatccactttgtagaattcgtcctgcaggtcaaggtg
ctgcctgtgaatgatgagccacctgttatgcaaacaggccttattcctgtgctgcactgc
ctggagggtgaagaagtggtcctctcctcagagtacatttatgccacagatgcagacagt
gatgacatgaaactgatgtttatgctggctcgccagccctaccacggggtagtaaggaaa
gctggcgttcctgtggatcgtttctcccaagctgacgtcatctctggtttagtcacatat
aagcacactagtggggagattggcctgacttcttccattgagatccttatgtttgttgtc
tctgacggtgaggctggcctagatgtgaaagactgctgttacgatggacctcttcctcct
ccagttccgcttcacgattcatttccagtatatgaacttaatatcactgtacttccagtg
gacaaccagcctccatcaattgcaactggtgcaaggtttgtggtggaggagggtgcctcc
gcagcccttaccaccaaccatttgtttgccactgaccctgacaccactgcagatgactta
gagtttgtcttggtttctcctccccagtttggttacgttgaaaacatactaccttctcct
gggtttgagaagagcaacattggtataagtatagcttcgtttcagctgaagcacttgaaa
gctctgagcataaactatgtacaagccaggcacttgcgaatggagccaacagcagaccac
tttgttctttatgtcactgatgggcttcatcgctcagcagagactccatttttcgtgctg
atcaacccaaccaatgatgaagtcccagaattcatagcaaggaatattaccgttcaagag
ggggagatgaaagaactggatctgtctgttatcaacgcaattgatctggatgtgcctcaa
gaccgtttggtatttggggttgtgcagaggcccttgtacgggttcctaattaatggaatt
tatggcaataatatcctacactataaagagttaattaatcatgaccatcacacccatggg
ttgcttgttcatgacttttccatggagctactgaagaacggaatgaagctgatgtacatg
catgacaattcagaaaacctcaccgacagctttaaaatccagctatctgatgggaaacat
aaagtcctcaagacgatttcagtaaaggtcattccagttaatgatgagaaaccggtgctg
agcaagaaggttgatatagagctgagcatgggtgaaactcgaataatttctagtgctgtt
ctgtcagcagaagataaagatacccccagggagagaatttactacttatttgaaagactt
ccagaaaatggtcagcttcagctcaaggtgggacaaggctggatgactctccaaactgga
atgaagtgcactcaagaagagctggatatgaaccttgtgagatatgtccatacaggagct
atagggtccaagaaccaagacagcttcacattttatctgtgggatgggtacaacagatcc
ccatctgtggacttctacataaatatcaaggacatggaaaagggagacattgctgttttc
ctcagacctcttagagtgccaaaaggggatcagggctacattacaaccgatgtcctcctt
gcactggatgatactgacaagccagaggagctcctctatgtgataacctccccaccccag
tatggacaaatagaatatgtcagctatcctgggatccccattacgagcttcaatcaaatg
gacgtagcaagacagatagtctgctatgttcacaacacaaaggcagttgttcctgaagat
acattcagattcatcatcagcaatggactgaggactaagcatgggacattcgtgatctcc
ttggaggcagctgaccaaactttgcccacactatctaggaacgcagggttaagattagtg
gaaggcgctatggcagtcctttctcctgatgtcctgcagctttcagacccagacactgcc
aaagaaaaccttaccttcctcctggctcagctcccccagtacggtcatctctattatcga
ggggctgtgctcctgcagtacaatttcacccagcaagatgtggacaacagggatgtttca
tacaagcaccgaggtggggattcccaaattgacagatttacatttgttgcaacagatagg
actaatcaaggcttcatcgtgaatgggagggtgcagagcgagccagtggcattcaccatt
caggtggatcatttggacaaaacagcaccaaaaattgttcatctccattgcttttctgac
gtggaactgctgaagaatggcaattatgggatctatataactgccagatccctgaaggca
tctgatcccaatacagaagatgacaaaataatttttaagattctacgaggtcctcattat
ggctacctggaaaatataacaacaggtggatttattcaggaagggtttagccaaaaggat
ttgaacagcaaaaccatactttatgtcatcaatacatcgtgggaagaagttaattcagac
aacgtggagtttcaagtcacagatgccagtggaaatgccgcagtaccccaaaggctggag
ctgcggtggtctcggattgaattgcaacagactgaatatgaagtgtgtgagagcgtggga
gtggtgtctctgaaaatcaccagggcaggacactctgcagagtctgcctttatcgctgtg
aaggtcaatgaagtatctgctatgctgggaaaggactttacagtgactcccgtcaagctt
cttcagtttgatccaggtatgaaccagtgcactgaataa
DBGET
integrated database retrieval system
