Chlamydotis macqueenii (Macqueen's bustard): 104481693
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Entry
104481693 CDS
T08437
Symbol
DHX38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104481693 (DHX38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmac03041
]
104481693 (DHX38)
Enzymes [BR:
cmac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104481693 (DHX38)
Spliceosome [BR:
cmac03041
]
Complex C
Other components
Step II factors
104481693 (DHX38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
Flavi_DEAD
T2SSE
PhoH
Microtub_bd
SRP54
AAA_30
SLFN-g3_helicase
AAA_16
AAA_7
Sigma54_activ_2
MRP-S31
Motif
Other DBs
NCBI-GeneID:
104481693
NCBI-ProteinID:
XP_010121283
LinkDB
All DBs
Position
Unknown
AA seq
846 aa
AA seq
DB search
MLTSGVVHRIEVDEDFEEDNSAKVHLLVHNLVPPFLDGRIVFTKQPEPVIPVKDATSDLA
IIARKGSQLVRKHREQKERKRAQHKHWELAGTKLGDIMGIKKEEEKDEMVTEDGKVDYKT
EQKFAEHMKEKSEASSEFAKKKSILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGK
TTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSE
NTVIKYMTDGILLRESLREADLDNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLV
VTSATMDADKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQVHLSGAPG
DILVFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKC
IVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRAGRAGRTG
PGHCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNML
NSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVP
AIFYRPKGREEESDQVREKFAVPESDHLTYLNVYLQWKNNSYSTLWCNQHFIHAKAMRKV
REVRAQLKDIMVQQRMSLASCGTDWDVVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHL
HPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGKSRQEN
RRRAKEEVSAMEEEMALAEEQLRARREEQERRNPLGSARSTKIYTPGRKEQGEPLTPRRT
PARFGL
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccagtggtgtggttcatcggattgaagtggatgaagattttgaagaggataac
tctgctaaagtacatctgttggtgcacaacctggtgccccctttcctagacggaaggatt
gtgttcaccaagcagccagagccagtcatccctgtcaaggatgccacctcagatttggcc
atcatagcccggaaaggcagccaattggtgcgcaagcacagggagcaaaaggagcgtaag
agggctcagcataagcactgggagctggcaggcacaaaactgggtgacattatggggatc
aagaaagaggaggagaaggacgagatggtgacagaagatggcaaagtggattacaagacc
gagcagaagtttgccgaacacatgaaagaaaaaagtgaagccagcagtgagtttgccaag
aagaaatcaatcctggagcagagacagtatctgcccatctttgctgtgcagcaggagctg
ctctccatcctcagagacaacagcattgtgattgtggtgggggagacggggagcgggaag
acgactcagctgacgcagtacctccatgaggatggctacacagactacggcatgattggc
tgcacccagccccgcagagtggcagccatgtcggttgccaagcgggtcagtgaagagatg
ggggtgcgtctgggagaggaggtgggctatgccatccgctttgaggactgcacgtccgag
aacacagtgatcaaatacatgacagatggtatccttcttcgcgagtcgctgcgagaggct
gacctggacaactacagtgctatcatcatggacgaggcacatgagcgctcactcaatact
gacgtgctctttggcctgcttcgggaggtggtggcccgacgctcagatctgaagcttgtt
gtcacctcggccaccatggatgcagataaatttgcctccttcttcgggaacgttcctatt
ttccacattcctgggcgcactttccctgttgatattcttttcagcaagaccccgcaagag
gattatgtggaggctgcagtgaaacaagccctgcaggtccacttgtctggtgctcctgga
gacatcctagtcttcatgcccggccaggaggacatagaggtgacctcagagcaaattgtg
gagcaccttgaggagctggagaaggcgcctgctcttgctgtactgcctatctattctcag
ctaccatcggacttgcaggccaagatcttccagaaggctccggatggggtcaggaagtgc
attgttgccactaacatcgcagagacctcactgacagtggatggcatcatgtttgtgatt
gactctggctactgcaagttgaaggttttcaacccccgtataggcatggatgcgctgcag
atctaccccatcagtcaggctaatgccaatcagagggcaggccgagctggtcgaacaggc
ccgggccactgcttcaggctctacacccagagtgcctacaagaatgaactgctgacaacc
acggtgcccgagatccagcgtaccaaccttgccaacgtagtgcttttgctcaagtccctg
ggtgtgcaggacctgctgcagtttcacttcatggatccgccccccgaggacaacatgctg
aactccatgtaccagctgtggatcctgggggctctggataacacaggtggtctgacctca
acaggacgtctcatggtggagttcccactggatcctgcgctctccaaaatgctcattgtc
tcctgcgacatgggttgcagctctgagatcttgctcattgtctctatgttgtctgtgcct
gccatcttttatcggcctaagggcagagaggaggagagcgaccaagtgcgggagaaattt
gctgttccggagagcgatcacctgacttacctgaatgtttatctgcagtggaagaacaac
agctattctacgctgtggtgcaaccagcacttcatccacgccaaggccatgcggaaggta
cgggaggtgcgtgcccagctcaaggacattatggtgcaacagcggatgagcctggcatcc
tgtggtactgactgggatgttgtcaggaaatgcatctgtgctgcatatttccatcaagct
gcaaagctgaagggcattggggagtacgtgaacatccgcacaggcatgccctgccacctg
caccccacaagctctctgtttggcatgggctacacaccagactacattgtgtatcatgag
ctggtcatgaccaccaaggaatacatgcagtgtgtcactgctgtggacggagagtggctg
gcggagctgggccccatgttctacagtatcaaacatgctggcaagtcacgccaggagaac
cgccgccgtgccaaggaggaagtgtctgccatggaggaagagatggctttggctgaggag
cagctgcgtgcccgccgggaggagcaggagcgccgtaaccccctgggcagtgcaagatct
actaaaatctacacccctgggcgaaaggagcagggggagcccctgacgccacgacgcacc
ccagcccgctttggcctctaa
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