Colossoma macropomum (tambaqui): 118799609
Help
Entry
118799609 CDS
T09004
Symbol
irf6
Name
(RefSeq) LOW QUALITY PROTEIN: interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118799609 (irf6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmao04147
]
118799609 (irf6)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
118799609 (irf6)
Exosome [BR:
cmao04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118799609 (irf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
118799609
NCBI-ProteinID:
XP_036415465
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MSVHPRRVRLKPWLVAQIDNGTFPGLVWLDREAKRFQIPWKHATRHTAQQEEENTIFKAW
AVETGKFQEGVDEPDPAKWKAQLRCALNKSREFNLIYDGTKEVPMNPLKIYDVCDIPQPL
SNPGSTGSAPAYDSDGEDDDVPDTPEPPPPPYHPPVSSSPLAPPVWTPPGSVSPMQPPSC
TPAPPEVWPKKEPMDIEMDVQPAGTEPQPISAIPDTLFTTPETWISSLPMTDLEVQFYYR
GKEMCPAMTVSNPQGCRLFYGDLGPMVNQEELFGPISLEQLRFPSTDQINNDKQRLFTNR
LLDVMDRGLILEVSGHDIYAVRLCQCKVYWSGPCAPNPNAPNLIERQRKVKLFCLETFLS
GVIAHQRGQSPALPQFDIHLCFGEEWPDGRPRERKLIMVQVIPVVARIICEMFSGDGTRS
FDSSSVRLQISVPDIKDNIVTQLKQLYRLLQTHQGHDTWPLPPGANVHLPTALHAQ
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgcacccccggcgtgtgcggctgaagccctggctggtggctcagatagataac
gggacgttcccgggtttggtgtggttggaccgcgaagccaaacgcttccagatcccgtgg
aaacacgccacgcggcacacggcccaacaggaagaggagaacaccatcttcaaggcatgg
gccgtggagacggggaagtttcaggagggagttgatgaacctgatccggcgaagtggaaa
gctcagctgcgctgcgccctcaacaagagccgggagtttaacctcatctatgacggcacc
aaggaggttcccatgaaccccctgaagatctacgacgtgtgtgacatccctcagcctctc
agcaaccccggttctacaggttcagctcctgcgtatgattctgatggtgaggatgatgat
gtgccagatacaccagaacccccaccacctccataccacccgccagtgagcagctcccct
ctggcccccccagtttggacccccccaggctctgtgtcacccatgcagcctcccagctgc
accccggcccctccggaggtgtggcctaagaaggagccgatggacatagagatggacgtt
cagccggccggcacggagccgcagcccatttcagccataccggacacgctgttcaccacc
ccggagacctggatcagctccctgcccatgacggatctggaggtgcagttttattaccgt
ggtaaggagatgtgtccagcgatgacggtcagtaaccctcagggttgccggctgttctac
ggtgatctgggtccgatggtgaatcaggaggagctgtttgggccgatttctctcgagcag
ctccgctttccctccaccgatcaaatcaacaacgacaagcagcgcctcttcaccaaccgc
ttgctggacgtcatggaccgcggcctcatcctggaggtcagcggacacgacatctacgcc
gtccggctgtgtcagtgtaaggtgtactggtctggaccctgcgcccccaaccccaacgcc
ccaaacctcatcgaacgccagcgcaaggtcaaactcttctgcctggagaccttcctcagc
ggtgtgattgcgcaccagcgtggtcagtctcctgcccttcctcagtttgatatccacctg
tgtttcggagaggagtggccagacggccggccgagagagaggaagctcatcatggtgcag
gtgatcccggtggtggctcggatcatctgtgagatgttctccggtgacggcacgcgctcg
ttcgacagcagcagcgtccgcctgcagatctccgtccccgacatcaaagacaacatcgtc
acgcagctgaagcagctctaccgcctcctacagacgcaccagggacacgacacctggccc
ctccccccgggggccaacgtccacctgcccaccgccctgcacgctcagtaa
DBGET
integrated database retrieval system
