Colossoma macropomum (tambaqui): 118799815
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Entry
118799815 CDS
T09004
Symbol
cxxc1b
Name
(RefSeq) CXXC-type zinc finger protein 1b
KO
K14960
COMPASS component SPP1
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118799815 (cxxc1b)
03036 Chromosome and associated proteins [BR:
cmao03036
]
118799815 (cxxc1b)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
118799815 (cxxc1b)
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
118799815 (cxxc1b)
COMPASS/SET1 complex (yeast)
118799815 (cxxc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
MutS_IV
Motif
Other DBs
NCBI-GeneID:
118799815
NCBI-ProteinID:
XP_036415761
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MMDSEMSDMDQPPAVDNSSMEEENAPLYCICRKPDINCFMIGCDSCNEWFHGHCINVTEK
MAKAIREWYCQRCQEMDPSLEIKYRSKKNREKEAEPERAEKRSSTPDFKLDKRRGSKVKR
SARMCGECEPCRRTEDCAQCDFCKDMKKFGGPNKIRQKCRLRQCVVRARKMLRVRDEEFS
LRERRENIMHRDRRYSDDFDENEMELYQQYKEQNMPWGSEDEDGPVYSPARRKKAIKVKH
VKRREKKIDKKKESRRHKQKQKHKDRMRHSDRADGHHTGDLRQCLGPNCIEAARPNSKYC
SEDCGMKLAANRIYEILPQRIQQWQQSPCVAEEQGKKQLERIRREQQAARMRLAEMERRF
HELEGIIAKAKQQVVQQDEEVNETDSEDTDLQIFCVSCSHPINPKVALRHMERCYAKYES
QTSFGSVFPTRIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKVPVDEVCGCPLVQN
VFEPTGEYCKVSKRKCNKHYCWEKLRRAEVDLERVRVWYKLDELFEQERNVRTAMTNRAG
LLALMLHQTIQHDPLTTDLRSNKDR
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgatggacagtgaaatgtctgatatggatcagcctccagctgtggataacagcagcatg
gaggaggagaatgcacccttgtactgcatatgtcggaaaccagacatcaactgtttcatg
attgggtgtgacagctgtaatgagtggttccacggtcactgcataaacgtgactgaaaag
atggccaaagctatcagagagtggtactgccagcgatgtcaggagatggatccatctctt
gagataaagtaccggtccaagaagaatcgagaaaaggaagctgaaccagagagagctgaa
aagcggtcaagtactccagacttcaaacttgataagcgtcgaggatctaaagtcaagcgg
tctgcacgtatgtgtggcgaatgtgaaccctgccggcgcactgaggactgtgctcaatgt
gacttctgcaaagacatgaaaaaattcgggggcccaaacaaaatccggcagaaatgtcga
ctgagacagtgtgtagtccgtgcacggaaaatgctgcgcgttcgggatgaggagttttcc
ctgcgtgagaggagggagaatataatgcacagagacagacgatactcggacgactttgat
gagaatgagatggagctataccagcaatacaaggagcaaaacatgccatggggaagtgag
gatgaggatgggcctgtttatagccctgctcggcgcaaaaaagcaataaaagtaaagcac
gttaagaggcgagagaagaaaattgacaaaaagaaggagtctcgtcggcataagcagaaa
cagaagcataaagataggatgcgacacagtgacagggccgacggccatcatactggagat
ttacgccagtgcctgggcccaaactgcattgaggcagcccgcccaaactctaaatactgc
tctgaggactgtggcatgaagctggcagccaatcggatctatgagattttgccacagcgc
atccaacaatggcaacaaagtccgtgtgtggcggaggagcagggcaagaagcagctggag
cgaatccggcgtgagcagcaggctgcgcgcatgcgcctcgctgaaatggagcgtcgcttc
catgaattggaggggatcatcgcaaaagccaaacagcaggtggtgcagcaggacgaggag
gtgaatgaaacagacagtgaggatacagaccttcagatcttctgtgtttcctgcagtcat
cccattaaccccaaggtggcgctgaggcatatggagaggtgttacgctaagtatgaaagc
cagacatcgtttgggtccgttttcccaacgcgaatagaaggggcgacgagactgttctgt
gatgtttataaccctcagagtaaaacatactgcaaaagacttcaagtgttatgtccggaa
cactccagagacccaaaggtgccagtggatgaggtgtgtggatgtcctttagtgcagaat
gtgtttgagccgacaggtgaatactgcaaggtttcaaagcgcaagtgcaacaaacattac
tgttgggagaaactccggagggcagaagtggacctagagcgtgtccgagtgtggtacaag
ctggatgagttgtttgagcaggagcgcaatgtgaggacagcgatgacgaacagagcgggg
ctgctggccctaatgctgcaccaaaccatacagcatgacccactgaccactgacttgcgc
agcaacaaggacagatag
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integrated database retrieval system
